Gene Information

Name : L083_5548 (L083_5548)
Accession : YP_007953538.1
Strain : Actinoplanes sp. N902-109
Genome accession: NC_021191
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6359785 - 6360474 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
GTGGGTGCTGCGGTGAGCCCGCTGCTGGAGGCGGTCGGCCTGCACAAGGCGTACGGCCCGACCGTCGCGCTGGCCGGTGC
CGACCTGATCGTGCACGCCGGCGAGATCCTGTCGGTCATGGGACCGTCCGGGTCCGGCAAGTCCACGCTGCTGCACTGCG
CGGCCGGGCTGACCGCCCCGGACGCCGGAGCCGTGCTGTACGAGGGCCGCGACCTGTCGCGCGCCTCCGATGCCGAGCGC
AGTGCGCTGCGGCGTCGCGCCTTCGGCTTCGTGTTCCAGTTCGGACAGCTGGTGCCCGAGCTCAGCGCACTGGAGAACGT
GGCGCTGCCGCTGCGGCTCGACGGCGTGTCCCGGCGCCGGGCGGAGGCGCGCGCCCTGGCCTGCCTGGACCGCTTGCAGG
TGGCCGACAAGCGGGCCGGCCTGCCCGGTGAGCTGTCCGGCGGCCAGCAGCAGCGGGTGGCGGTGGCCCGGGCCCTGGTC
ACCGAGCCGCGGGTGGTGTTCGCCGACGAGCCGACCGGTGCCCTGGACTCGGTGGCCGGGGAACGGGTGATGACGCTGCT
GACCGGGGCGGCGCGCGAGTCCGGCACGGCGGTCGTGCTGGTCACCCATGACGTACGGGTGGCCGCGTACGCCGACCGGG
GCATCACCGTGCGCGACGGGCGCAGCCTGTCCCGGGCCGGCGCCCGATGA

Protein sequence : 
MGAAVSPLLEAVGLHKAYGPTVALAGADLIVHAGEILSVMGPSGSGKSTLLHCAAGLTAPDAGAVLYEGRDLSRASDAER
SALRRRAFGFVFQFGQLVPELSALENVALPLRLDGVSRRRAEARALACLDRLQVADKRAGLPGELSGGQQQRVAVARALV
TEPRVVFADEPTGALDSVAGERVMTLLTGAARESGTAVVLVTHDVRVAAYADRGITVRDGRSLSRAGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_5548 YP_007953538.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-35 45
L083_5548 YP_007953538.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-35 43
L083_5548 YP_007953538.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-25 43
L083_5548 YP_007953538.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L083_5548 YP_007953538.1 ABC transporter ATP-binding protein VFG2059 Protein 4e-17 43