Gene Information

Name : J113_12740 (J113_12740)
Accession : YP_007961703.1
Strain : Mycobacterium tuberculosis CAS/NITR204
Genome accession: NC_021193
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 2078631 - 2080979 bp
Length : 2349 bp
Strand : -
Note : COG2225 Malate synthase

DNA sequence :
ATGACAGATCGCGTGTCGGTGGGCAACTTGCGCATCGCTCGGGTGCTCTACGACTTCGTGAACAATGAAGCCCTGCCTGG
CACCGATATCGACCCGGACAGCTTCTGGGCGGGCGTCGACAAGGTCGTCGCCGACCTGACCCCGCAGAACCAAGCTCTGT
TGAACGCCCGCGACGAGCTGCAGGCGCAGATCGACAAGTGGCACCGGCGTCGGGTGATCGAGCCCATCGACATGGATGCC
TACCGCCAGTTCCTCACCGAGATCGGCTACCTGCTTCCCGAACCTGATGACTTCACCATCACCACGTCCGGTGTCGACGC
TGAGATCACCACGACCGCCGGCCCCCAGCTGGTGGTGCCGGTGCTCAACGCGCGGTTTGCTCTGAACGCGGCCAACGCTC
GCTGGGGCTCCCTCTACGACGCCTTGTATGGCACCGATGTCATCCCCGAGACCGACGGCGCCGAAAAAGGCCCCACGTAC
AACAAGGTTCGTGGCGACAAGGTGATCGCGTATGCCCGCAAGTTCCTCGACGACAGTGTTCCGCTGTCGTCGGGTTCCTT
TGGCGACGCCACCGGTTTCACAGTGCAGGATGGCCAGCTCGTGGTTGCCTTGCCGGATAAGTCCACCGGCCTGGCCAACC
CCGGCCAGTTCGCCGGCTACACCGGCGCAGCCGAGTCGCCGACATCGGTGCTGCTAATCAATCACGGTTTGCACATCGAG
ATCCTGATCGATCCGGAGTCGCAGGTCGGCACCACCGACCGGGCCGGCGTCAAGGACGTGATCCTGGAATCCGCGATCAC
CACGATCATGGACTTCGAGGACTCGGTGGCCGCCGTGGACGCCGCCGACAAGGTGCTGGGTTATCGGAACTGGCTCGGCC
TGAACAAGGGCGACCTGGCAGCAGCGGTAGACAAGGACGGCACCGCTTTCCTGCGGGTGCTCAATAGGGACCGGAACTAC
ACCGCACCCGGCGGTGGCCAGTTCACGCTGCCTGGACGCAGCCTCATGTTCGTCCGCAACGTCGGTCACTTGATGACGAA
TGACGCCATCGTCGACACTGACGGCAGCGAGGTGTTCGAAGGCATCATGGATGCCCTATTCACCGGCCTGATCGCCATCC
ACGGGCTAAAGGCCAGCGACGTCAACGGGCCGCTGATCAACAGCCGCACCGGCTCCATCTACATCGTCAAGCCGAAGATG
CACGGTCCGGCCGAGGTGGCGTTTACCTGCGAACTGTTCAGCCGGGTTGAAGATGTGCTGGGGTTGCCGCAAAACACCAT
GAAGATCGGCATCATGGACGAGGAACGCCGGACCACGGTCAACCTCAAGGCGTGCATCAAAGCTGCCGCGGACCGCGTGG
TGTTCATCAACACCGGGTTCCTGGACCGCACCGGCGATGAAATCCACACCTCGATGGAGGCCGGCCCGATGGTGCGCAAG
GGCACCATGAAGAGCCAGCCGTGGATCTTGGCCTACGAGGACCACAACGTCGATGCCGGCCTGGCCGCCGGGTTCAGCGG
CCGAGCCCAGGTCGGCGGGCATGTGGACAATGCCGAGCTGATGGCCGACATGGTCGAGACAAAAATCGCCCAGCCGCGCG
CCGGGGCCAGCACCGCCTGGGTTCCCTCTCCCACTGCGGCCACCCTGCATGCGCTGCACTACCACCAGGTCGACGTCGCC
GCGGTGCAACAAGGACTGGCGGGGAAGCGTCGCGCCACCATCGAACAATTGCTGACCATTCCGCTGGCCAAGGAATTGGC
CTGGGCTCCCGACGAGATCCGCGAAGAGGTCGACAACAACTGTCAATCCATCCTCGGCTACGTGGTTCGCTGGGTTGATC
AAGGTGTCGGCTGCTCGAAGGTGCCCGACATCCACGACGTCGCGCTCATGGAGGACCGGGCCACGCTGCGAATCTCCAGC
CAATTGTTGGCCAACTGGCTGCGCCACGGTGTGATCACCAGCGCGGATGTGCGGGCCAGCTTGGAGCGGATGGCGCCGTT
GGTCGATCGACAAAACGCGGGCGACGTGGCATACCGACCGATGGCACCCAACTTCGACGACAGTATCGCCTTCCTGGCCG
CGCAGGAGCTGATCTTGTCCGGGGCCCAGCAGCCCAACGGCTACACCGAGCCATCCATGCCCGACGTCGTCGGGAGTTTA
AGGCCCGGGCCGCTGAGAAGCCGGCCCCATCGGACAGGGCCGGTGACGATGCGGCCCGCTAGCGGGCCGCTGTGGGGGCA
CCGCCCGCTTGCGGGAGAGAGCCGGCCCCATCGGGCAGAGCCGGTGCGTAGCTCGTGCTTGACAGGCGCCGGCCTTCGAC
GGAGAGGACGCAGACGCCGGTATGGGTAG

Protein sequence :
MTDRVSVGNLRIARVLYDFVNNEALPGTDIDPDSFWAGVDKVVADLTPQNQALLNARDELQAQIDKWHRRRVIEPIDMDA
YRQFLTEIGYLLPEPDDFTITTSGVDAEITTTAGPQLVVPVLNARFALNAANARWGSLYDALYGTDVIPETDGAEKGPTY
NKVRGDKVIAYARKFLDDSVPLSSGSFGDATGFTVQDGQLVVALPDKSTGLANPGQFAGYTGAAESPTSVLLINHGLHIE
ILIDPESQVGTTDRAGVKDVILESAITTIMDFEDSVAAVDAADKVLGYRNWLGLNKGDLAAAVDKDGTAFLRVLNRDRNY
TAPGGGQFTLPGRSLMFVRNVGHLMTNDAIVDTDGSEVFEGIMDALFTGLIAIHGLKASDVNGPLINSRTGSIYIVKPKM
HGPAEVAFTCELFSRVEDVLGLPQNTMKIGIMDEERRTTVNLKACIKAAADRVVFINTGFLDRTGDEIHTSMEAGPMVRK
GTMKSQPWILAYEDHNVDAGLAAGFSGRAQVGGHVDNAELMADMVETKIAQPRAGASTAWVPSPTAATLHALHYHQVDVA
AVQQGLAGKRRATIEQLLTIPLAKELAWAPDEIREEVDNNCQSILGYVVRWVDQGVGCSKVPDIHDVALMEDRATLRISS
QLLANWLRHGVITSADVRASLERMAPLVDRQNAGDVAYRPMAPNFDDSIAFLAAQELILSGAQQPNGYTEPSMPDVVGSL
RPGPLRSRPHRTGPVTMRPASGPLWGHRPLAGESRPHRAEPVRSSCLTGAGLRRRGRRRRYG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 58