Gene Information

Name : clpB (KPR_1358)
Accession : YP_007990339.1
Strain : Klebsiella pneumoniae SB3432
Genome accession: NC_021232
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1416707 - 1419292 bp
Length : 2586 bp
Strand : +
Note : highly similar to chaperone protein ClpB from Salmonella typhimurium (sp|Q7CQ01)

DNA sequence :
ATGGGAGGAGTTATGCGTCTGGATCGTCTTACCAATAAATTCCAGCTTGCTCTTGCCGATGCCCAGTCGCTCGCACTCGG
GCACGACAACCAATTCATCGAACCTCTTCATTTAATGAGCGCCTTGCTGAATCAGGAAGGGGGATCGGTACGTCCTTTAT
TAACCTCGGCGGGCGTGAATGCCGGGAAACTGCGCACTGACATCGAACAGGCCTTGAGCCGTTTACCGCAGGTGGAAGGC
ACCGGCGGCGATGTGCAACCTTCTCAGGATTTAGTGCGGATCCTCAACCTTTGCGACAAGCTGGCGCAAAAGAAAAAGGA
CAACTTTATTTCGTCGGAACTGTTCGTTCTGGCGGCGCTTGAATCACGCGGTACGCTGACCGACCTTTTAAAATCCGCCG
GAGCAACAACCGCCAACGTGACTCAAGCGATTGAACAAATGCGCGGAGGGGAAAGCGTGAACGATCAGGGTGCCGAAGAC
CAACGTCAGGCATTGAAGAAATTTACCGTCGATCTCACCGAGCGTGCCGAGCAGGGCAAGCTGGATCCGGTGATCGGCCG
TGATGAAGAGATTCGCCGTACCATTCAGGTACTGCAGCGTCGTACCAAAAACAACCCGGTGCTGATCGGTGAACCCGGGG
TGGGTAAAACGGCAATCGTCGAAGGCCTGGCGCAGCGTATCGTCAACGGCGAAGTACCAGAAGGGCTGAAAGGCCGTCGG
GTATTGGCGCTGGATATGGGGGCGCTGGTGGCCGGGGCGAAATACCGCGGTGAGTTTGAAGAGCGTCTGAAAGGCGTGCT
GACCGACCTGTCAAAACAGGAAGGTAACGTCATTCTGTTTATCGACGAACTGCATACCATGGTTGGCGCTGGTAAAGCCG
ACGGCGCGATGGATGCGGGTAACATGCTGAAGCCGGCGCTGGCGCGTGGTGAACTGCACTGCGTCGGGGCGACGACGCTT
GATGAATACCGTCAGTACATCGAAAAAGACGCCGCGCTGGAACGTCGCTTCCAGAAAGTGTTCGTCGCCGAGCCTTCGGT
AGAAGATACCATCGCGATTCTGCGCGGTCTGAAAGAACGTTATGAGCTGCACCACCACGTGCAGATCACTGACCCGGCTA
TCGTGGCGGCGGCGACCTTATCGCATCGCTATATTGCCGACCGTCAGCTGCCGGATAAAGCCATCGACCTCATCGATGAG
GCGGCATCCAGCATCCGTATGCAGATTGACTCCAAACCGGAAGAGCTGGACCGCCTCGATCGGCGTATTATCCAGCTGAA
ACTGGAACAGCAGGCGCTGAAGAAAGAGTCTGATGAGGCGAGCCTGAAGCGTCTCGATATGCTCAACGAGGAGCTGGCGG
ATAAAGAACGGCAGTATTCGGTGCTGGAAGAAGAGTGGAAAGCGGAAAAAGCGTCGCTCTCCGGTACCCAGACCATCAAA
GCTGAGCTGGAGCAGGCGAAAATAGCCATCGAACAGGCGCGTCGCGTCGGCGATCTGGCGCGGATGTCCGAGCTGCAGTA
CGGCAAAATTCCGGAACTGGAGAAACAGCTGGCGGCGGCCACGCAGGCCGAAGGGAAAACCATGCGTCTGCTGCGTAATA
AAGTGACGGATGCTGAAATCGCCGAAGTGCTGGCTCGCTGGACCGGTATCCCGGTCTCCCGCATGATGGAAAGCGAGCGT
GACAAACTGCTGCGTATGGAACAGGAGCTGCATCATCGGGTGATTGGCCAGGATGAGGCGGTTGAAGCGGTATCCAACGC
CATTCGCCGCAGCCGCGCCGGGCTGTCCGATCCGAACCGGCCGATTGGTTCGTTCCTGTTCCTCGGTCCAACCGGGGTCG
GTAAAACCGAGCTGTGTAAAACGCTGGCTAACTTTATGTTCGATAGCGACGACGCGATGGTGCGTATCGATATGTCCGAG
TTTATGGAGAAACATTCCGTCTCGCGTCTGGTCGGTGCGCCTCCGGGATACGTCGGCTATGAAGAGGGCGGTTACCTGAC
CGAGGCGGTGCGCCGTCGTCCTTATTCCGTCATCCTGCTGGATGAAGTGGAAAAAGCGCACCCGGATGTGTTCAACATTC
TGCTGCAGGTACTCGACGACGGGCGTCTCACCGACGGGCAGGGGAGAACGGTCGACTTCCGTAATACGGTAGTCATCATG
ACCTCGAACCTCGGTTCCGATCTGATTCAGGAACGGTTCGGCGAGCTGGACTACGGACATATGAAGGACCTGGTGCTGGG
GGTAGTCAGCCAGAACTTCCGTCTGGAGTTCATCAACCGTATCGACGAAGTGGTGGTCTTCCATCCGCTGGGCGAGAAAC
ATATTGCCTCTATTGCCCAGATCCAGCTGCAGCGTCTGTATAAACGTCTGGAAGAGCGCGGATATGAAGTGCAGATATCC
GATGAGGCGCTGAAGCTGCTGAGCGCCAACGGTTACGATCCGGTATACGGCGCGCGGCCATTGAAACGTGCTATTCAGCA
GCAGATTGAGAACCCGTTAGCCCAGCAGATCCTTTCCGGTGAGCTGGTTCCGGGTAAAACCATCGAGCTGGTAGTAAAAG
ACGACCGCATTGTGGCAGTGCAGTAA

Protein sequence :
MGGVMRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAGVNAGKLRTDIEQALSRLPQVEG
TGGDVQPSQDLVRILNLCDKLAQKKKDNFISSELFVLAALESRGTLTDLLKSAGATTANVTQAIEQMRGGESVNDQGAED
QRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRR
VLALDMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTL
DEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE
AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIK
AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQAEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER
DKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDMSE
FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM
TSNLGSDLIQERFGELDYGHMKDLVLGVVSQNFRLEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVQIS
DEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKTIELVVKDDRIVAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 8e-102 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-96 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-96 41