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Name : rpoB (KPR_0300) Accession : YP_007989283.1 Strain : Klebsiella pneumoniae SB3432 Genome accession: NC_021232 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 327088 - 331149 bp Length : 4062 bp Strand : + Note : highly similar to DNA-directed RNA polymerase subunit beta from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TGP0) DNA sequence : ATGGGTCGACTTGTCAGCGAGCTGAGGAACCCTATGGTTTACTCCTATACCGAGAAAAAACGTATTCGTAAGGATTTTGG TAAACGTCCACAAGTTCTGGATGTGCCATATCTCCTTTCTATCCAGCTTGACTCGTTCCAGAAGTTTATCGAGCAAGATC CTGAAGGGCAGTATGGTCTGGAAGCTGCTTTCCGTTCCGTATTCCCGATTCAGAGCTACAGCGGTAATTCCGAGCTGCAA TACGTCAGCTACCGTCTGGGCGAACCGGTTTTTGACGTTAAAGAATGTCAGATCCGTGGCGTGACTTATTCTGCACCGCT GCGCGTAAAACTGCGTCTGGTGATCTACGAGCGCGAAGCGCCAGAAGGCACCGTCAAAGACATTAAAGAACAAGAAGTCT ACATGGGCGAAATTCCGCTCATGACCGACAACGGTACCTTTGTTATCAACGGTACCGAGCGTGTTATCGTTTCTCAGCTG CACCGTAGCCCGGGCGTCTTCTTTGACAGTGACAAAGGTAAGACCCACTCCTCCGGTAAGGTTCTGTATAACGCACGTAT CATCCCTTACCGCGGTTCCTGGCTGGACTTCGAATTCGACCCGAAAGACAACCTGTTCGTTCGTATCGACCGTCGTCGTA AGCTGCCGGCTACCATCATCCTGCGCGCGCTGAATTACACCACTGAGCAGATCCTTGACCTGTTCTTCGAAAAAGTGGTC TTTGAAATTCGCGACAACAAGCTGCAGATGGAGCTGATTCCGGAGCGTCTGCGCGGTGAAACTGCCTCCTTCGATATCGA AGCCAACGGCAAAGTGTACGTTGAGAAAGGCCGTCGCATCACGGCTCGTCATATCCGTCAGCTGGAAAAAGACGATATCA AGCATATCGAAGTGCCAGTTGAATATATCGCGGGCAAAGTGGCGGCTAAAGACTATATCGATGAAGCGACTGGCGAACTG ATCTGCCCGGCGAACATGGAGCTGAGCCTGGATCTGCTGGCTAAGCTGAGCCAGTCTGGCCACAAGCGTATCGAAACGCT GTTCACCAACGATCTGGACCACGGCCCGTACATCTCTGAAACGGTACGCGTCGACCCGACTAACGATCGTCTGAGCGCGC TGGTAGAAATCTACCGCATGATGCGCCCTGGCGAGCCGCCGACTCGTGAAGCCGCTGAAAGTCTGTTTGAGAACCTGTTC TTCTCTGAAGACCGCTACGATCTGTCCGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGACGAAATCGAAGG TTCCGGTATCCTGAGCAAAGACGACATCATCGAAGTGATGAAGAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTGG ACGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCGGAAAACCAGTTCCGCGTTGGCTTGGTA CGTGTAGAGCGTGCGGTGAAAGAGCGTCTGTCTCTTGGCGATCTGGATACCCTGATGCCTCAGGATATGATCAACGCCAA GCCGATTTCCGCAGCAGTGAAAGAGTTCTTTGGTTCCAGCCAGCTGTCTCAGTTTATGGACCAGAACAACCCGCTGTCTG AGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGCCTGACCCGTGAGCGCGCAGGCTTCGAAGTTCGAGAC GTACACCCGACCCACTACGGTCGCGTATGTCCGATCGAAACGCCTGAAGGTCCGAACATCGGTCTGATTAACTCCCTGTC CGTGTACGCGCAGACCAACGAATATGGCTTCCTTGAGACGCCGTATCGTAAAGTGACCAACGGTGTGGTTACTGACGAAA TTCACTACCTGTCTGCTATCGAAGAAGGCAACTACGTTATCGCTCAGGCGAACTCCAACCTGGATGAAAACGGCCACTTC GTAGAAGATCTGGTTACCTGCCGTAGCAAAGGCGAATCCAGCTTGTTCAGCCGCGACCAGGTTGACTACATGGACGTATC CACCCAGCAGGTGGTATCCGTCGGTGCGTCCCTGATCCCGTTCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTG CGAACATGCAACGTCAAGCGGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACCGGTATGGAACGTGCTGTTGCC GTTGACTCCGGTGTTACTGCCGTGGCTAAACGTGGCGGTACCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGT TAACGAAGACGAGATGTACCCGGGCGAAGCAGGTATCGACATCTATAACCTGACCAAGTACACCCGTTCTAACCAGAACA CCTGCATCAACCAGATGCCTTGCGTGTCCCTGGGCGAACCTATTGAGCGCGGCGACGTGCTGGCAGACGGCCCGTCCACC GACCTCGGTGAGCTGGCGCTGGGTCAGAACATGCGTGTAGCGTTCATGCCGTGGAACGGTTACAACTTCGAAGACTCTAT CCTCGTTTCCGAGCGTGTTGTCCAGGAAGACCGTTTCACCACTATCCACATTCAGGAACTGGCGTGCGTGTCCCGTGACA CCAAGCTGGGGCCGGAAGAGATCACCGCTGATATCCCGAACGTGGGTGAAGCTGCGCTCTCTAAACTGGATGAGTCCGGT ATCGTTTATATCGGTGCGGAAGTGACCGGCGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACCCAGCTGAC GCCGGAAGAGAAACTGCTGCGCGCGATCTTCGGTGAGAAAGCGTCTGACGTTAAAGACTCTTCTCTGCGCGTACCGAACG GTGTCTCTGGTACCGTTATCGACGTTCAGGTCTTTACCCGTGACGGCGTAGAAAAAGACAAACGTGCTCTGGAAATCGAA GAGATGCAGCTGAAGCAGGCCAAAAAAGACCTGTCTGAAGAACTGCAGATCCTCGAAGCCGGTCTGTTCAGTCGTATCTA CGCGGTGCTGGTCTCCGGTGGCGTTGAAGCTGAGAAGCTCGACAAGCTGCCTCGCGATCGCTGGCTGGAACTGGGCCTGA CCGACGAAGAGAAACAAAATCAGCTGGAACAGCTGGCTGAGCAGTATGACGAACTGAAACACGAGTTCGAGAAAAAACTC GAAGCGAAACGCCGTAAAATCACCCAAGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCCGT TAAACGCCGTATCCAGCCTGGTGATAAGATGGCAGGTCGTCACGGTAACAAGGGTGTTATCTCTAAGATCAACCCGATCG AAGATATGCCGCACGATGCTAACGGTACGCCGGTGGATATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATC GGTCAGATCCTTGAAACTCACCTGGGTATGGCTGCAAAAGGCATCGGCGATAAGATCAACGCCATGCTGAAACAGCAGCA GGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCTTACGATCTGGGCGCTGACGTTCGCCAGAAAGTTGACCTGAATA CCTTCAGCGATGAAGAAGTTCTGCGTCTGGCTGAAAACCTGCGTAAAGGCATGCCGATCGCAACGCCGGTATTCGACGGT GCGAAAGAAGCTGAAATCAAAGAGCTGCTGCAGCTGGGCGACCTGCCGACTTCCGGTCAGATCACCCTGTTTGATGGCCG CACCGGTGAACAGTTCGAACGTCCGGTAACCGTGGGTTACATGTACATGCTGAAACTGAACCACCTGGTCGACGACAAAA TGCACGCTCGTTCCACCGGTTCTTACAGCCTGGTTACTCAGCAGCCGCTGGGTGGTAAGGCACAGTTCGGTGGTCAGCGC TTCGGTGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCGGCCTACACCCTGCAGGAAATGCTCACCGTTAAGTCTGA TGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAATCACCAGATGGAACCGGGCATGCCGGAATCCT TCAACGTACTGTTGAAAGAAATTCGCTCGCTGGGCATCAACATCGAACTGGAAGACGAGTAA Protein sequence : MGRLVSELRNPMVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQSYSGNSELQ YVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQL HRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVV FEIRDNKLQMELIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKDYIDEATGEL ICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLF FSEDRYDLSAVGRMKFNRSLLRDEIEGSGILSKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLV RVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRD VHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTNGVVTDEIHYLSAIEEGNYVIAQANSNLDENGHF VEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVA VDSGVTAVAKRGGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERGDVLADGPST DLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESG IVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIE EMQLKQAKKDLSEELQILEAGLFSRIYAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKL EAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPHDANGTPVDIVLNPLGVPSRMNI GQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYDLGADVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDG AKEAEIKELLQLGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQR FGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 71 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rpoB | YP_007989283.1 | hypothetical protein | CP000034.1.gene3741. | Protein | 0.0 | 99 |
| rpoB | YP_007989283.1 | hypothetical protein | CP001138.1.gene4362. | Protein | 0.0 | 99 |
| rpoB | YP_007989283.1 | hypothetical protein | CP000647.1.gene4402. | Protein | 0.0 | 99 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_002695.1.914942.p | Protein | 0.0 | 99 |
| rpoB | YP_007989283.1 | hypothetical protein | CP001918.1.gene250.p | Protein | 0.0 | 99 |
| rpoB | YP_007989283.1 | hypothetical protein | CP004022.1.gene2794. | Protein | 0.0 | 94 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_002516.2.881699.p | Protein | 0.0 | 74 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_009085.4918494.p0 | Protein | 0.0 | 71 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_011595.7060572.p0 | Protein | 0.0 | 71 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_010410.6003841.p0 | Protein | 0.0 | 71 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_011586.7046027.p0 | Protein | 0.0 | 71 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_010400.5987325.p0 | Protein | 0.0 | 71 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_010611.6233925.p0 | Protein | 0.0 | 71 |
| rpoB | YP_007989283.1 | hypothetical protein | CP000675.2.gene392.p | Protein | 0.0 | 70 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_008702.1.4609796. | Protein | 0.0 | 66 |
| rpoB | YP_007989283.1 | hypothetical protein | CP002695.1.gene18.p0 | Protein | 0.0 | 65 |
| rpoB | YP_007989283.1 | hypothetical protein | NC_011035.1.6448762. | Protein | 0.0 | 64 |
