|
Name : secD (KPR_4362) Accession : YP_007993336.1 Strain : Klebsiella pneumoniae SB3432 Genome accession: NC_021232 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4487531 - 4489378 bp Length : 1848 bp Strand : - Note : highly similar to SecYEG protein translocase auxillary subunit SecD from Escherichia coli O111:H- strain 11128 - EHEC (tr|C8UII9) DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGGTCGTCGTCATTGTCGTCGGCCTGATCTATGCGCTTCCCAA CCTGTATGGTGAGGATCCGGCTGTTCAAATCACTGGCGCGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAAAACTTTACAAGAAGAAAAAATAACCGCGAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACC ACTGATACCCAGCTGCGCGCGCGCGAAGCGCTGCTTAACGTGCTGGGTGACAAATACGTCGTGGCGCTGAACCTTGCTCC GGCAACCCCACGCTGGCTGGCGGCGCTCTATGCCGAGCCGATGAAGCTGGGTCTTGATCTGCGCGGTGGCGTGCACTTCC TGATGGAAGTCGACATGGACACCGCGTTAGGCAAACTGCAGGAACAGAACATCGATAGCCTGCGCAGCGAGCTGCGCGAC AAAGGCATTCCTTACGCGACCGTGCGTAAAGAAGACAACTACGGTCTGAGCATCGTCTTCCGCGACAGCGCGGCGCGCGA CCAGGCTATCTCTTATCTCAGCCCTCGCCATCGCGATCTGGTTATTTCCTCTCAGGGTGACAACAGCCTGAAAGCGGTGA TGACCGATGAGCGCCTGAAAGAAGCCCGTGAGTACGCGGTTCAGCAGAACATTAATATCCTGCGTAACCGTGTGAACCAG CTGGGCGTCGCCGAGCCGCTGGTTCAGCGTCAGGGCGCTGACCGCATCGTGGTTGAGCTGCCGGGTATCCAGGATACCGC GCGTGCGAAGGAAATCCTTGGCGCGACCGCGACCCTCGAGTTCCGTCTGGTCAATACTAACGTGGACCAGTCCGCCGCCG CCTCTGGCCGCGTGCCGGGCGACTCGGAAGTGAAGCAGACGCGTGAAGGCCAGCCGGTAGTGCTGTACAAGCGGGTGATC CTGACCGGGGACCATATCACCGACTCGACCTCCAGCATGGATGAGTACAACCAGCCGCAGGTTAACATCTCGCTGGACAG CGCGGGCGGTAACATCATGTCTAACTTCACTAAGGACAACATCGGCAAGCCGATGGCGACCCTGTTCGTGGAGTATAAAG ACAGCGGTAAGAAAGACGCTAACGGTCGCGCTATCCTGGCGAAAGAGGAAGAGGTGATTAACATCGCCAACATCCAGTCG CGTCTGGGTAACAGCTTCCGTATCACCGGTATCAGCAATCCGAACGAAGCGCGTCAGCTGTCGCTGCTGCTGCGTGCCGG CGCGCTGATTGCGCCGATTCAGATCGTCGAAGAGCGGACTATCGGCCCAACCCTGGGAATGCAGAACATCAAGCAGGGTC TGGAAGCCTGTCTGGCCGGTCTGGTGGTCTCTATCCTGTTCATGATCCTCTTCTATAAGAAGTTCGGCCTGATTGCGACC TCGGCACTGATAGCCAACCTGATACTGATTGTCGGCATTATGTCCCTGATCCCGGGGGCGACGCTGACCATGCCGGGCAT CGCGGGTATCGTGTTAACCCTTGCGGTGGCGGTCGATGCTAACGTTCTGATCAACGAGCGTATCAAAGAAGAGCTGAGCA ACGGGCGTACCGTTCAGCAGGCGATTGACGAAGGTTATCGCGGCGCGTTCAGCTCGATCTTCGACGCCAACGTGACGACG CTTATCAAAGTGATCATCCTGTACGCGGTCGGTACCGGTGCCATTAAAGGGTTTGCGATTACCACCGGTATCGGTATCGC GACCTCAATGTTTACCGCTATCGTCGGCACCCGTGCCATCGTGAACCTGCTGTACGGCGGCAAGCGCGTTAAAAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYVMLVVVIVVGLIYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDT TDTQLRAREALLNVLGDKYVVALNLAPATPRWLAALYAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSELRD KGIPYATVRKEDNYGLSIVFRDSAARDQAISYLSPRHRDLVISSQGDNSLKAVMTDERLKEAREYAVQQNINILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQSAAASGRVPGDSEVKQTREGQPVVLYKRVI LTGDHITDSTSSMDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILAKEEEVINIANIQS RLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMILFYKKFGLIAT SALIANLILIVGIMSLIPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANVTT LIKVIILYAVGTGAIKGFAITTGIGIATSMFTAIVGTRAIVNLLYGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-120 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-119 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 48 |
