Gene Information

Name : fecI3 (PFLCHA0_c10040)
Accession : YP_007998300.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1131112 - 1131747 bp
Length : 636 bp
Strand : -
Note : -

DNA sequence : 
ATGATAAATATTCTCATATGCAAAAAAGCCCAGGCACAGCCACTGGCTGCCGGCGATGCGGGCGGATTGCCGAATGCCAT
ATCGCCCCACTACAATGCGAACAATTCTTGTTCTCTTATGCGCCATCTCGGTGCAGGAGCGTCCGGCTTGTCCCACACCG
CTACCGTCGAAGGCCTCTACCAGGCCCATCACAGCTGGTTGAACACCTGGTTGCGGCGCCGGCTCGGCTGCCCCCACAGC
GCCGCAGACCTGGCCCAGGACACCTTCATCCGGGTACTCAGCGCCCGGGAAACACCGGCCCTGATCGAGCCCCGGGCGTT
TCTCACCACCATCGCCAAGCGCGTGCTGTTCAACCACTACCGGCGCCAGGACCTGGAGCGGGCCTATCAGGAAACCCTGG
CGCAGATGCCTGAACAGGTGGCGCCCTCCGAGGAAGAGCGGGCCATCATCCTGCAAACCCTGATGGATCTGGACAGCCTG
CTCGACGGCCTGCCGCGGCCGGTCAAGCGAGCCTTTCTGCTGTGCCAGCTGGACGGCCTGACCTACGGCGAAATCGCCCG
GGAGCTGAATATCTCCATCGCCACGGTCAAACGCCACCTGAACAAAGCGGCGATGCGCTGCTACTTCGCCCTGTGA

Protein sequence : 
MINILICKKAQAQPLAAGDAGGLPNAISPHYNANNSCSLMRHLGAGASGLSHTATVEGLYQAHHSWLNTWLRRRLGCPHS
AADLAQDTFIRVLSARETPALIEPRAFLTTIAKRVLFNHYRRQDLERAYQETLAQMPEQVAPSEEERAIILQTLMDLDSL
LDGLPRPVKRAFLLCQLDGLTYGEIARELNISIATVKRHLNKAAMRCYFAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-37 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI3 YP_007998300.1 putative RNA polymerase sigma factor FecI VFG1049 Protein 1e-37 53