Gene Information

Name : fecI1 (PFLCHA0_c01450)
Accession : YP_007997451.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 169901 - 170428 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence :

ATGTGCGCAGTTTCATTCATGCAAGCCACCACTGACGGCAACGCTCAACTCCATCGTCTGTATCAGGATCATCACGGCTG
GTTGCAGGGCTGGTTGCGCAAGCGCCTGGGCGATCGCGAGCATGCCGCGGACGTGGCGCAGGACACCTTCCTGCGCCTCT
TGCTCTCGGGGCGTTTTCCCGGGCAGCAGGAAAGCCGCAGCTACCTGGCGCAGATCGCCCGCAACCTGGTGGTCGACCAA
TGGCGGCGCGCGCGCATCGAGCGCGCCTACCTGGAAAGCATCGCCCACTTGCCGGAGCCGCAGACCCCCTCCCTGGAAAG
CCGCGCGCTGATTCTCGAAACCCTGATGCAGATCGACGCCATGCTCGACCGCATGCCGGACAAGGTGCGCCAGGCCTTTG
TCATGTCGCAGTTCGAGGGGCTGGGCTATGCGCAGATTGCCGAGCGCCTGGAGGTTTCCGTCAGCTCGGTGCAGAAGTAT
ATGACCCGTGCGATCCAGGCCTGTTACCAGGTGCTCTACGCAGAATGA

Protein sequence :

MCAVSFMQATTDGNAQLHRLYQDHHGWLQGWLRKRLGDREHAADVAQDTFLRLLLSGRFPGQQESRSYLAQIARNLVVDQ
WRRARIERAYLESIAHLPEPQTPSLESRALILETLMQIDAMLDRMPDKVRQAFVMSQFEGLGYAQIAERLEVSVSSVQKY
MTRAIQACYQVLYAE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	7e-35	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI1	YP_007997451.1	putative RNA polymerase sigma factor FecI	VFG1049	Protein	3e-35	46