Gene Information

Name : fecI4 (PFLCHA0_c23560)
Accession : YP_007999631.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2598024 - 2598545 bp
Length : 522 bp
Strand : +
Note : -

DNA sequence :

ATGCCCGCCGACGACTTATCCCTGCGCTGTGCCGTCACCGACCTCTACACCCATCACCATGGCTGGCTGCAGGGCTGGTT
GCGCCAGCGCCTGGGCAACGCCTTCGATGCCGCCGACCTGGCCCAGGACACCTTCGTGCGGGTGCTCAAGGCGCGCAACG
CAGTGGAGATCCGTGAGCCGCGGCCCTACCTGTCGCGCATTGCCCGGGGCCTGCTGATCGATCTGTTTCGCCGACGTTCC
CTGGAGCAGGCCTACCTCGAAGCCCTGGCCCTGGTACCCGAGGGCGAGCACCCGTCGCCGGAGGAGCAGAGCGTGCTGTT
CCAGGCGCTGATGGAAATCGACCGGCTGCTGGATGGCCTGGGGCCCAAGGTGAAACAGGCTTTCCTTCTGTCCCAGTGCG
ACGGCCTGACCTACGAACAGATCGCCGAGCGCCTGCAGATTTCCGTGCGCAGCGTGAGCAACTACATGGCCAAGGCCATG
GAGCATTGCTGCCTGATGCAGATGCGGATGCAGCTGTCATGA

Protein sequence :

MPADDLSLRCAVTDLYTHHHGWLQGWLRQRLGNAFDAADLAQDTFVRVLKARNAVEIREPRPYLSRIARGLLIDLFRRRS
LEQAYLEALALVPEGEHPSPEEQSVLFQALMEIDRLLDGLGPKVKQAFLLSQCDGLTYEQIAERLQISVRSVSNYMAKAM
EHCCLMQMRMQLS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	5e-40	54

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI4	YP_007999631.1	putative RNA polymerase sigma factor FecI	VFG1049	Protein	2e-40	54