Gene Information

Name : yecC (PFLCHA0_c02480)
Accession : YP_007997553.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Resistance
Product : amino-acid ABC transporter ATP-binding protein YecC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 287659 - 288420 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
ATGATCGTGGTGGAAAAACTGACCAAGCAGTTCAAGGGCCAGACGGTGCTCAATGGCATCGACCTGGAGGTCAAGGAAGG
CGAAGTGGTCGCCATCATCGGCCCCAGCGGCTCGGGCAAGACCACCTTCCTGCGCTGCCTGAATTTTCTCGAAGAACCCA
CCAGCGGCCGCATCCGCATCGGTGACATCAGCATCGACAGCGGCATCCCCCTGAGCCATCAGCAGGGCCGGATCCGCCAG
TTGCGCCAGCAAGTGGGCTTCGTGTTCCAGAACTTCAACCTGTTCCCCCACCGCACCGCCCTGGAGAACGTCATCGAAGG
CCCGCTGGTGGTGAAGAAAACCCCGCGGGAGCAAGCCGTCGCCCTGGGTCGCGCGCTGCTGGCCAAGGTCGGGCTGGCAG
GTAAGGAAGATGCCTACCCCAGGCGCCTGTCCGGCGGCCAGCAACAGCGGGTAGCGATCGCCCGGGCCCTGGCCATGGAA
CCGCGGGTGATCCTGTTCGACGAACCCACCTCGGCCCTGGACCCGGAGCTGGTGGGTGAAGTACTGGCCACCATCCGCAG
CCTGGCCGAAGAGAAACGCACCATGGTCATCGTCACCCACGAGATGGGCTTTGCCCGGGACGTGGCCAACCGGGTGATCT
TCTTCGACAAGGGGGTGATCGTCGAACAGGGCGAAGCCAAGGCGCTGTTCGCCAACCCCCAGCACGAACGCACCCGACAG
TTTCTCAGCAAGTTCCTCGGCGCAAGCCACGCCCCCTTGTAG

Protein sequence :
MIVVEKLTKQFKGQTVLNGIDLEVKEGEVVAIIGPSGSGKTTFLRCLNFLEEPTSGRIRIGDISIDSGIPLSHQQGRIRQ
LRQQVGFVFQNFNLFPHRTALENVIEGPLVVKKTPREQAVALGRALLAKVGLAGKEDAYPRRLSGGQQQRVAIARALAME
PRVILFDEPTSALDPELVGEVLATIRSLAEEKRTMVIVTHEMGFARDVANRVIFFDKGVIVEQGEAKALFANPQHERTRQ
FLSKFLGASHAPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yecC YP_007997553.1 amino-acid ABC transporter ATP-binding protein YecC NC_012469.1.7686878. Protein 1e-25 42