Gene Information

Name : fecI6 (PFLCHA0_c35250)
Accession : YP_008000797.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3933677 - 3934186 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence : 
ATGGTGCCCAACCCTTCGCTACAGCACGCCGTGGGCGAGCTCTACCTCCAGCATCACAACTGGGTGGTGCAACTGCTGCG
ACGCAAGCTCGGCAACCAGGACCAGGCCATGGACCTGGCGCAGGACACCTTTGTGCGCATCTTGCGCAGCGAGCGACTGC
CGGTACTGCGCGAACCCCGGGCCTACCTCAACACCGTGGCCAGCCGCCTGTGCGGGCAGTATTTCCGGCGCCAGGCCCTG
GAGCGCGCATACCTGGAAACCCTGGCGCAGCTGGAGCCGCAGTACCAGCCCTCGCCGGAAACCCGGCTGCTGGTGCTTGA
GGCCCTGGACGCCGTGGGCCAGGTGCTGGACGGCCTGGGCAGCCGGGTGCGCGAGGTGTTTCTGCTGTCCCAGCTCGAAG
GCCTGACCTACCCGCAAATTGCCCAACGCCTGCAGCTCTCGGTCAACGTGGTGCAGAAAGCCATGCTCAAGGCCTACCGC
CACTGCTACGCGGCGGTGTACCCGGGATGA

Protein sequence : 
MVPNPSLQHAVGELYLQHHNWVVQLLRRKLGNQDQAMDLAQDTFVRILRSERLPVLREPRAYLNTVASRLCGQYFRRQAL
ERAYLETLAQLEPQYQPSPETRLLVLEALDAVGQVLDGLGSRVREVFLLSQLEGLTYPQIAQRLQLSVNVVQKAMLKAYR
HCYAAVYPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-30 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI6 YP_008000797.1 putative RNA polymerase sigma factor FecI VFG1049 Protein 1e-30 49