Gene Information

Name : fecI7 (PFLCHA0_c42500)
Accession : YP_008001513.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4805134 - 4805673 bp
Length : 540 bp
Strand : -
Note : -

DNA sequence :

ATGATAACAATTACCATTAGCGTGCCGGTCTCGATGCACAGTCCCGTAGACACCAAAGCCATAGTTGCCAACCTCTATAG
CGAGAATTACCGCTGGTTGCGTGCCTGGCTGTATCGCCGATTGCAGTGCCCGCAGGATGCCGCGGATCTGACTCAGGACA
CCTTCGTGCGCACGCTGACCGCCGGCCAACTGGCCGATCTCAACGAACCGCGGGCCTTTCTCGCCACGGTGGCCAGGCGC
TTGTTGAGCAACCTGTTCCGGCGCCGTGCCTTGGAGCAGCAGTACCTGCTGGAACTGGCGCGGATGCCGCAGGCCTTCAG
CCCCTCCGAAGAGGAGCTGGCGCTGGTGCGCGAAGCGCTGGAACTGATCGACCGGCTGCTCGAAGGTCTACCGCAACGGG
TGCGCCATGCTTTTATCCTGCATCGCCTTGAAGGCCTGGCGCAGCCGCAGATCGCCGAGCGCCTGGGAGTTTCTCTGGCG
ACCGTCGAGCGCGACCTGCGGCGAGCCTTCCTGCATTGCCTCAGCGAGCGCGCCGCATGA

Protein sequence :

MITITISVPVSMHSPVDTKAIVANLYSENYRWLRAWLYRRLQCPQDAADLTQDTFVRTLTAGQLADLNEPRAFLATVARR
LLSNLFRRRALEQQYLLELARMPQAFSPSEEELALVREALELIDRLLEGLPQRVRHAFILHRLEGLAQPQIAERLGVSLA
TVERDLRRAFLHCLSERAA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-22	45

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI7	YP_008001513.1	putative RNA polymerase sigma factor FecI	VFG1049	Protein	5e-23	45