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Name : secD (PFLCHA0_c49560) Accession : YP_008002210.1 Strain : Pseudomonas fluorescens CHA0 Genome accession: NC_021237 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 5561925 - 5563793 bp Length : 1869 bp Strand : - Note : - DNA sequence : ATGCTGAACAAATATCCTCTGTGGAAGTACCTACTGATCCTGGCGGTGCTGGCGATCGGTTTTATTTATTCCGCTCCCAA TCTATACCCTGATGATCCGGCCATTCAGGTCAGCGGCGCGAGTACCGCGTTGCAGGTTACTCAGGCGGATCTGGATCGTG CGAGCAAAGCGCTCACCGACGCCGGCATCAACGTCAAGGCTTCTTCCATTGCCGCCAACGGCAAGGGTGGCCTGCTGCGC TTGACCAACAAGGAAGACCAGCTTCCGGCCAAGGATGTAGTGCGCAAGGCGCTGGGCGATGACTATGTGGTGGCGTTGAA CCTGGCGCAAACCACTCCGCAATGGCTGCGCAACCTCGGTGCGCACCCGATGAAACTGGGTCTGGACTTGTCCGGTGGTG TGCACTTCCTGCTGGAAGTGGACATGGACAAAGCCCTCGACGCCCGCCTGAAAGTCTATGAAGGCGACGTCAAGAGCCTG CTGCGCAAAGAGCGCCTGCGCTATCGCAGCCTGCCGCAGCTCAATGGCGCCATCCAGCTGGGCTTCAGCGATGAAGACAG TCGTGAGCAGGCCCGTTCGCTGATCCGCAAGAACTTCAATGATTTCGATATCGTACCGGCCGACCTCAATGGCCAACCGG TGCTGCGTCTGGCGATGACCCCAGCCAAGCTGGCGGAAATCCGCGAATACTCCATCAAGCAGAACTTGACCACCGTGCGT AACCGGGTCAACGAGCTGGGTGTGGCCGAGCCTCTGGTTCAGCGCCAGGGTGCCAACCGTATCGTGGTTGAGCTGCCGGG CGTGCAGGACACCGCTGAAGCCAAGCGGATCCTGGGCAAGACCGCCAACCTGGAGTTCCGTCTGGCCGCCGAGCCGGGTG CTTCCAAGGCGACTTCCGAGTCCTTCGAATTCCGTGAGGGCAATCGTCCTCCAGCGCAGATCGAGCGTGGCCTGATCATC ACCGGTGACCAGGTGACCGATGCCCAGGCCGGTTACGACGAGCATGGCCGCCCACAGGTGAACATCAAGCTTGATGGCCA CGGTGGCGAGCTGATGAACCGTTCGACCCGCAGCAACGTCGGCCGCAGCATGGCGGTGATCTTCATCGAGCAGAAGCCGA TCACCACCTATACCAAGCAGGTGGTCGACGGCGTCGAGAAGGACGTGCCGGTCCAGGCGTTCAAGGAAGAGAAGAAGATC ATCAGCCTGGCGACCATTCAGTCGCCGCTGGGCAGTCAGTTCCGTATCACTGGCCTCAATGGCCAGGGCGAGTCCTCCGA ACTGGCGCTGCTGTTGCGTGCCGGTGGTCTGGCGGCGCCGATGTACTTCGCTGAAGAGCGCACAATCGGTCCGAGCCTGG GTGCTGACAACATCACCAAGGGTATCGATGCGTCGCTGTGGGGCATGCTGTTCGTGTCGCTGTTCATCATCGCCATCTAC CGCTTCTTCGGGGTGATCGCCACTGTGGCGCTGGCCTTGAACATGGTGTTGCTGCTGGCCCTGATGTCCCTGCTGGGGGC TACGCTGACCCTGCCGGGTATCGCCGGTATCGTGCTGACCATGGGCATGGCGGTGGACGCCAACGTGCTGATCTTCTCGC GGATACGTGAAGAGATCGCCGCCGGCATGACCGTGCAGCGAGCAATCAACGAAGGCTTCGGCCGGGCATTCACCGCGATT CTGGACTCCAACCTGACCACATTGCTGGTGGGTGGCATCCTCTTTGCCATGGGCACCGGCCCGGTCAAGGGCTTTGCGGT GACCATGTCCCTCGGGATCTTTACCTCGATGTTCACGGCCATCTGGCTGACCCGCGCGATGGTCAACCTGATCTTCGGCG GTCGTGACTTCAAGAAGTTGTGGATTTAA Protein sequence : MLNKYPLWKYLLILAVLAIGFIYSAPNLYPDDPAIQVSGASTALQVTQADLDRASKALTDAGINVKASSIAANGKGGLLR LTNKEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNLGAHPMKLGLDLSGGVHFLLEVDMDKALDARLKVYEGDVKSL LRKERLRYRSLPQLNGAIQLGFSDEDSREQARSLIRKNFNDFDIVPADLNGQPVLRLAMTPAKLAEIREYSIKQNLTTVR NRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPGASKATSESFEFREGNRPPAQIERGLII TGDQVTDAQAGYDEHGRPQVNIKLDGHGGELMNRSTRSNVGRSMAVIFIEQKPITTYTKQVVDGVEKDVPVQAFKEEKKI ISLATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIY RFFGVIATVALALNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMTVQRAINEGFGRAFTAI LDSNLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAIWLTRAMVNLIFGGRDFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 88 |
