Gene Information

Name : pilD (PFLCHA0_c52610)
Accession : YP_008002507.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : type 4 prepilin-like proteins leader peptide-processing enzyme PilD
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.23.43
Position : 5878887 - 5879759 bp
Length : 873 bp
Strand : +
Note : -

DNA sequence :
ATGCCCCTGACTGACGCCCTCACTCTCTACCCCATGGCATTCGTGGCTGCGGCCCTGGTATTGGGCCTGATCGTCGGCAG
CTTTCTCAACGTGCTGGTGTGGCGCCTGCCGAAAATGCTCGAACGCGACTGGCGAGCCCAGGCCCGCGACGTGCTGGGGC
TGGAGCCGGAACCAGTGACTGCGCCCTATAACCTGATGCTGCCGCGCTCCCAGTGCCCGCACTGTGCGCAGGCAATCCGC
CCCTGGGAAAACATTCCGCTGCTCAGTTACCTGTGGCTGCGTGGCCGCTGCGCCCACTGCAATAGCTCCATCAGCCCGCG
CTACCCGTTGACCGAACTGGCTTGCGGGCTGATCTCGGGTTTTATCGCCTGGCACTTCGGCTTCGGCTGGGCGGCCGGGC
TGATGCTGATCCTCAGTTGGGGGCTGCTGGCAATGAGCCTGATCGACGCCGATCACCAGTTGCTGCCGGATGTGCTGGTG
CTGCCACTGTTGTGGCTGGGGCTGATCGCCAACAGTTTCGGCCTGCTGATCAGCCTGGAGGATGCGCTGTGGGGGACGGT
GATCGGCTACCTGTTCCTGTGGTCGGTGTTCTGGCTGTTCAAGCTGCTGACCGGCAAGGAGGGCATGGGCCACGGTGATT
TCAAGCTGCTGGCCCTGTTCGGGGCCTGGGGCGGCTGGCAGATCCTGCCGCTGACCCTGCTGCTGTCATCCCTGTTGGGG
GCGATTCTCGGCACGATCCTGCTGCGCCTGCGCCGGGAAAAGACCTCGACGCCAATCCCCTTTGGACCCTTTCTGGCCAT
TGCCGGCTGGATTGCCTTGCTCTGGGGTGGTCAAATAACCGACTTCTATCTGCAGTTTGTCGGTTTCCAATGA

Protein sequence :
MPLTDALTLYPMAFVAAALVLGLIVGSFLNVLVWRLPKMLERDWRAQARDVLGLEPEPVTAPYNLMLPRSQCPHCAQAIR
PWENIPLLSYLWLRGRCAHCNSSISPRYPLTELACGLISGFIAWHFGFGWAAGLMLILSWGLLAMSLIDADHQLLPDVLV
LPLLWLGLIANSFGLLISLEDALWGTVIGYLFLWSVFWLFKLLTGKEGMGHGDFKLLALFGAWGGWQILPLTLLLSSLLG
AILGTILLRLRREKTSTPIPFGPFLAIAGWIALLWGGQITDFYLQFVGFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 4e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilD YP_008002507.1 type 4 prepilin-like proteins leader peptide-processing enzyme PilD VFG0114 Protein 5e-82 73
pilD YP_008002507.1 type 4 prepilin-like proteins leader peptide-processing enzyme PilD VFG2428 Protein 5e-38 50
pilD YP_008002507.1 type 4 prepilin-like proteins leader peptide-processing enzyme PilD VFG1882 Protein 3e-44 48
pilD YP_008002507.1 type 4 prepilin-like proteins leader peptide-processing enzyme PilD VFG0234 Protein 6e-37 46