Gene Information

Name : glcB (PFLCHA0_c56510)
Accession : YP_008002883.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 6289306 - 6291483 bp
Length : 2178 bp
Strand : +
Note : -

DNA sequence :
ATGACTGAGCACGTTCAAGTCGGTGGCCTGCAGGTCGCCAGAGTCCTGTTCGACTTCGTGAACAACGAAGCCATTCCCGG
TACCGGCCTCACCGCCGACTCGTTCTGGGCCGGTGCAGACAAGGTCATTCACGACCTGGCGCCGAAGAACAAAGCCCTAC
TCGCCAAACGCGATGACTTCCAGGCACGTATCGATGCCTGGCACCAGTCCCGTGCCGGCCAGGCGCATGACGCTGTGGCT
TATAAAGCCTTCTTGCAAGACATCGGTTACCTGCTGCCAGAAGCGGCGGATTTCCAGGCCACGACGCAAAACGTCGATGA
AGAAATCGCCCACATGGCCGGCCCGCAGCTGGTGGTGCCGGTGATGAATGCGCGCTTCGCCCTCAACGCTTCCAACGCTC
GCTGGGGCTCGCTGTACGACGCCCTGTACGGCACCGATGCCATCAGCGAAGCCGATGGTGCGGAAAAAGGCAAAGGCTAC
AACAAGGTCCGCGGCGACAAGGTCATCGCCTTCGCCCGCGCCTTCCTCGATGAATCCGCGCCGCTGACTGCCGGCTCCCA
CGTGGACTCGGTGAGCTACAAGATCGTCGGCGGCAAGCTGGTGGTCGGCCTCAAGGGTGGCAGCAACAGCGGCCTGCGCA
ACGACGCGCAACTGATCGGCTACCAGGGCGACGCTGCGGCCCCTACCGCGATCCTGCTCAAACACAACGGCCTGCACTTC
GAGATCCAGATCGACGCCACAAGCCCGGTCGGCCAGACCGACGCCGCCGGGGTCAAGGACCTGCTGATGGAAGCGGCCCT
GACTACCATCATGGACTGCGAAGACTCGGTCGCCGCAGTGGATGCCGACGACAAGGTGGTGATCTACCGCAACTGGCTCG
GCCTGATGAAAGGCGACCTGGCGGAAGAAGTTTCCAAGGGTGGCAAGTCCTTCACCCGCACCATGAACGCCGATCGCGAA
TACACCGGGGTCAATGGCGAGCCGGTGAAACTGCACGGTCGTTCGCTGCTGTTCGTGCGCAACGTCGGCCACCTGATGAC
CATCGATGCGATCCTCGACAAGGATGGCAACGAAGTGCCGGAAGGCATCCTCGACGGCCTGGTCACCAGCCTGGCGTCGA
TCCACAACCTCAACGGCAACACGTCGCGCAAGAACAGCCGCACCGGCTCGATGTACATCGTTAAGCCGAAGATGCACGGC
CCTGAAGAAGCGGCGTTCACCAACGAGCTGTTCGGCCGCATCGAAGAGGTGCTGAACCTGCCGCGCAACACCCTGAAAGT
CGGGATCATGGACGAGGAGCGCCGCACCACGGTCAACCTCAAGGCCTGCATCAAGGCGGCCAGCGAGCGCGTGGTGTTCA
TCAACACCGGCTTCCTCGACCGTACCGGCGACGAAATCCACACCTCCATGGAAGCCGGCGCCATGGTGCGCAAGGCCGAC
ATGAAGGCCGAGAAATGGATCGGCGCCTACGAGAACTGGAACGTCGATATCGGCCTGAGCACCGGCCTGCAAGGCCGCGC
GCAAATCGGCAAGGGCATGTGGGCGATGCCGGACCTGATGGCAGCGATGCTCGAACAGAAAATCGCTCACCCACTGGCCG
GCGCCAACACTGCCTGGGTTCCATCCCCGACCGCCGCTGCGCTGCACGCGCTGCACTATCACAAGGTCGACGTATTCGCC
CGCCAGGCCGAACTGGCCAAGCGTGCCCGCGCCTCGGTGGATGACATCCTGACCATCCCGCTGGCGGTCAACCCGAGCTG
GACGCCAGAGCAGATCAAGAACGAACTGGACAACAACGCCCAGGGCATTCTCGGTTACGTGGTGCGCTGGATCGACCAGG
GCGTGGGCTGTTCGAAAGTGCCGGACATCAATGACGTCGGCCTGATGGAAGACCGCGCCACCCTGCGTATCTCCAGCCAG
CACATCGCCAACTGGCTGCGCCACGGCGTGGTCACCCAGGAGCAGGTGCTCGAAAGCCTCAAGCGCATGGCTCCGGTGGT
TGACCGGCAGAACGCCAGCGACCCGCTGTACCGCCCCCTGGCACCGGACTTCGACAGCAACATCGCCTTCCAGGCCGCCC
TGGAACTGGTGATCGAAGGCACCAAGCAGCCAAACGGCTACACCGAGCCGGTCCTGCACCGCCGGCGTCGCGAGTTCAAG
GCCAAGAACGGTCTGTAA

Protein sequence :
MTEHVQVGGLQVARVLFDFVNNEAIPGTGLTADSFWAGADKVIHDLAPKNKALLAKRDDFQARIDAWHQSRAGQAHDAVA
YKAFLQDIGYLLPEAADFQATTQNVDEEIAHMAGPQLVVPVMNARFALNASNARWGSLYDALYGTDAISEADGAEKGKGY
NKVRGDKVIAFARAFLDESAPLTAGSHVDSVSYKIVGGKLVVGLKGGSNSGLRNDAQLIGYQGDAAAPTAILLKHNGLHF
EIQIDATSPVGQTDAAGVKDLLMEAALTTIMDCEDSVAAVDADDKVVIYRNWLGLMKGDLAEEVSKGGKSFTRTMNADRE
YTGVNGEPVKLHGRSLLFVRNVGHLMTIDAILDKDGNEVPEGILDGLVTSLASIHNLNGNTSRKNSRTGSMYIVKPKMHG
PEEAAFTNELFGRIEEVLNLPRNTLKVGIMDEERRTTVNLKACIKAASERVVFINTGFLDRTGDEIHTSMEAGAMVRKAD
MKAEKWIGAYENWNVDIGLSTGLQGRAQIGKGMWAMPDLMAAMLEQKIAHPLAGANTAWVPSPTAAALHALHYHKVDVFA
RQAELAKRARASVDDILTIPLAVNPSWTPEQIKNELDNNAQGILGYVVRWIDQGVGCSKVPDINDVGLMEDRATLRISSQ
HIANWLRHGVVTQEQVLESLKRMAPVVDRQNASDPLYRPLAPDFDSNIAFQAALELVIEGTKQPNGYTEPVLHRRRREFK
AKNGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 59