Gene Information

Name : fecI8 (PFLCHA0_c56550)
Accession : YP_008002887.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6295176 - 6295694 bp
Length : 519 bp
Strand : +
Note : -

DNA sequence :

TTGTCGTCAGTCCAAAGCCCTCACAATGAGCTGGTTGGTGCGTTGTATCGCGACCATCGTGGTTGGCTGTTGGCCTGGCT
ACGGCGCAACGTTGCCTGCAGCCAGCGGGCCGAGGACCTGAGCCAGGACACCTTCGTGCGCCTGCTGGGCCGCGACGAAC
TCAAGGCGCCCCGGGAGCCGCGGGCGTTTCTGGTGGCCATCGCCAAGGGCCTGCTGTTCGACTACTTCCGCCGCGCCGCG
CTGGAACAGGCTTACCTCAGCGAACTGATGCTGATCCCCGAAGGCGAACAACCGTCGCCCGAAGAACAGCAGATGATCCT
CGAAGACCTCAAGGCCATCGACCGCCTGCTGGGCAAGCTCTCCAGCAAGGCGCGCATGGCCTTCCTCTATAACCGCCTCG
ACGGCCTGAGCCACGCCGAGATCGCCGAACGCCTGGGGGTCTCGGTGCCAAGGGTGCGCCAATACCTGGCCCAGGGCATC
CGCCAGTGCTACATCGCCCTGTACGGGGAGCCGCTATGA

Protein sequence :

MSSVQSPHNELVGALYRDHRGWLLAWLRRNVACSQRAEDLSQDTFVRLLGRDELKAPREPRAFLVAIAKGLLFDYFRRAA
LEQAYLSELMLIPEGEQPSPEEQQMILEDLKAIDRLLGKLSSKARMAFLYNRLDGLSHAEIAERLGVSVPRVRQYLAQGI
RQCYIALYGEPL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	5e-29	48

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI8	YP_008002887.1	putative RNA polymerase sigma factor FecI	VFG1049	Protein	2e-29	48