Gene Information

Name : epd (PFLCHA0_c57390)
Accession : YP_008002971.1
Strain : Pseudomonas fluorescens CHA0
Genome accession: NC_021237
Putative virulence/resistance : Unknown
Product : D-erythrose-4-phosphate dehydrogenase Epd
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.72
Position : 6384481 - 6385590 bp
Length : 1110 bp
Strand : -
Note : -

DNA sequence :
ATGGTTTCACCACCGGTCATTGAGAACCCCATGCCTCAACCGCGTCCCTACAAAGTTGCACTCAACGGCTACGGCCGGAT
TGGTCGTTGCGTCTTGCGTGCTCTGTTCGAGCGAGGGGCTGCGGCCGGGTTCGAGATCGTTGCCATCAACGATCTGGCCG
ACATGGCCAGCGTTGAATACCTGACACGCTTCGATTCCACCCACGGGCGTTTTCCCGGTGAGGTGAAGGTCGATGGCGAT
TGTCTGCATATCAATGGCAACTGCGTGAAAGTGTTGCGCAGTGCCACCCCCGAAGGCATCGATTGGGCGTCCCTGGGCGT
CGATCTGGTGCTGGAATGCTCCGGTGCCTACCACACCCGCGAAGACGGCCAGCGTTTCCTCGACGCCGGCGCGCCGCGGG
TGCTGTTCTCCCAGCCGATGGCCAGCGAGGCGGATGTCGACGCCACCATCGTCTATGGGGTGAACCAGGACTGCCTGAGC
GGCGACGAACGGCTGGTGTCCAACGCCTCCTGCACCACCAACTGCGGCGTGCCGCTGTTGCGCCTGCTGGATCAGGCCAT
TGGCCTGGAGTACGTATCGATCACCACCATTCACTCGGCGATGAACGACCAGCCGGTGATCGACGCCTATCACCATGAAG
ACCTGCGGCGTACCCGTTCGGCCTTCCAGTCGGTGATCCCGGTGTCCACCGGTCTGGCGCGGGGTATCGAGCGCCTGTTG
CCGGAACTTGCCGGGCGAATTCAGGCCAAAGCAGTGCGGGTGCCGACGGTGAACGTGTCCTGCCTGGACATCACCATGCA
GACCGTGAGCGATACCGACGCCACCGAGGTCAACCGGATCCTGCGCGAGGCCGCCACCAGCGGTCCGCTCAAGGGCCTGC
TGGCCTACACCGAGCTGCCGCATGCCAGCTGTGATTTCAATCATGATCCCCATTCGGCGATCGTCGATGCCAGTCAGACC
CGTGTTTCCGGCCCCCGGCTGGTGAACATCCTGGCCTGGTTCGACAACGAATGGGGCTTTGCCAACCGAATGCTGGACGT
AGCTGGGCACTACCTGCACACAGCCGCTCCACGCACTGACACTCAACTCTCTGTTTCTGAAGAACAGTAA

Protein sequence :
MVSPPVIENPMPQPRPYKVALNGYGRIGRCVLRALFERGAAAGFEIVAINDLADMASVEYLTRFDSTHGRFPGEVKVDGD
CLHINGNCVKVLRSATPEGIDWASLGVDLVLECSGAYHTREDGQRFLDAGAPRVLFSQPMASEADVDATIVYGVNQDCLS
GDERLVSNASCTTNCGVPLLRLLDQAIGLEYVSITTIHSAMNDQPVIDAYHHEDLRRTRSAFQSVIPVSTGLARGIERLL
PELAGRIQAKAVRVPTVNVSCLDITMQTVSDTDATEVNRILREAATSGPLKGLLAYTELPHASCDFNHDPHSAIVDASQT
RVSGPRLVNILAWFDNEWGFANRMLDVAGHYLHTAAPRTDTQLSVSEEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 1e-83 51