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Name : NH44784_022621 (NH44784_022621) Accession : YP_008029349.1 Strain : Achromobacter xylosoxidans NH44784-1996 Genome accession: NC_021285 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase beta subunit Function : - COG functional category : - COG ID : - EC number : 2.7.7.6 Position : 2414286 - 2418398 bp Length : 4113 bp Strand : + Note : - DNA sequence : ATGCCTTACTCGTACACCGAAAAAAAGCGCATCCGCAAAAGCTTCGCCAAGCGTGAAGACGTTCAAAACGTTCCCTTCCT TTTGGCGACTCAGCTTCAATCCTACCTAACTTTCCTGCAGGCGGATACCGCCCCGTCCGATCGCGTAGCCGACGGTTTGC AGGCGGCGTTTTCGTCGATTTTCCCGATCGTTAGTCACAACGGTATGGCGCGCTTGGAGTTCGTGAGCTATGTGCTCGGC GAACCGGTGTTCGATGTCAAGGAATGTCAGCAACGTGGCCTGACCTATGCCTCGCCCCTGCGAGCCAAGGTCCGCCTGGT GCTGCTTGACCGCGAAGTCAGCAAGCCCACCGTCAAGGAAGTGAAGGAACAGGAAGTCTACATGGGCGAGATTCCGCTCA TGACCGGCACCGGTTCGTTCGTCATCAACGGCACCGAGCGTGTCATCGTCTCGCAGCTGCACCGCTCGCCTGGCGTGTTC TTCGAGCACGACCGCGGCAAAACGCACAGCTCGGGCAAGCTGCTGTTCTCGGCCCGCGTGATTCCCTACCGCGGTTCGTG GCTGGACTTCGAATTCGACCCCAAGGACATCCTGTTCTTCCGCGTCGACCGTCGCCGCAAGATGCCTGTCACCATCCTGT GCAAGGCCATCGGCATGACGCCGGAATCGATCCTGGCCAACTTCTTCGACTTCGACAACTTCGAGTTGAAGAGCGAAGGC GCCATGATGGAATTCGTGCCCGAGCGTTGGAAGGGCGAAATGGCCCGCTTCGACATCGCGGACCGTTCGGGCAAGGTCAT CGTCGAGAAAGACAAGCGTATCAACGCCAAGCACCTGCGCGACCTGGCTGCCGGCGGCATCCAGCGCATCTCCGTGCCGG AAGACTTCCTGTACGGCCGCGTGCTGGCCAAGAACATCGTTGACGCCGATACCGGCGAGGTCATCGCCAACGCCAACGAC GAGATCACCGAAAGCGTGCTGGGCGCCCTGCGCGCCGCCAACGTGCACGACATCCAGACGCTCTACACGAACGACCTGGA TCGCGGCCCGTACATCTCGCAGACGCTGCGCACCGATGAAACCGCCGACCAGATGGCCGCGCGCGTTGCCATCTACCGCA TGATGCGTCCTGGCGAACCGCCCACCGAAGAAGCGGTGGAAGCACTGTTCCAGCGCCTGTTCTACAGCGAAGAAACGTAC GATCTGTCGCGCGTCGGCCGCATGAAGGTCAACAGCCGCCTGGGCCGTGGTGAAGACATCACCGGCCCGATGACGCTGAC CAACGAAGACATCCTTGAAACCATCAAGGTGCTGGTCGAGCTGCGTAACGGCCGTGGCCAGATCGACGACATCGATCACC TGGGCAACCGCCGCGTGCGTTGCGTCGGCGAACTGGCCGAGAACCAGTTCCGCGCCGGCCTCGTGCGCGTCGAACGCGCC GTCAAGGAACGTCTGGGCCAGGCCGAGACCGAAAACCTGATGCCGCACGACCTGATCAACTCCAAGCCGATCTCGGCCGC CATCAAGGAGTTCTTCGGTTCGAGCCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAAATCACGCACAAGC GTCGTGTTTCCGCACTGGGCCCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAAGTCCGTGACGTGCACCCGACCCAC TACGGCCGCGTCTGCCCGATCGAAACGCCGGAAGGCCCGAACATCGGTCTGATCAACTCCATGGCGCTGTACGCTCGCCT GAACGAGTACGGCTTCCTGGAAACGCCTTACCGCAAGATCGTCGACGGCCGCGTCAGCGACCAGATCGACTACCTGTCCG CCATCGAAGAAAGCCACTACGTGATCGCGCAGGCCAACGCCGCGCTCGATGACGAAGGCAAGTTCGTGGACGACCTGGTG GCTTGCCGTGAAGCCGGCGAAACCATGCTGACCGCCCCGGCCAACGTGCACTACATGGACGTGGCCCCGTCGCAGATCGT GTCGGTCGCCGCCTCGCTGATTCCGTTCCTGGAGCACGACGACGCGAACCGCGCACTGATGGGCGCCAACATGCAGCGTC AGGCCGTGCCTTGCCTGCGTCCGGAAAAGCCCGTCGTGGGCACGGGGATCGAGCGCACCGTGGCCGTTGACTCGGGCACC ACCGTGCAGGCGCTGCGTGGCGGCCTGGTCGACCACGTCGACGCCGAGCGCGTGGTTATTCGCGTGAACGACGAAGAAAA CGTCGCCGGCGAAGTCGGTGTCGATATCTACAACCTGATCAAGTACACGCGTTCCAACCAGAACACGAACATCAACCAGC GTCCCATCGTCAAGCGTGGCGACCGTGTCGCCAAGGGTGACGTGCTGGCCGATGGCGCATCGACGGACCTGGGCGAACTC GCCCTGGGCCAGAACATGCTGATCGCGTTCATGCCCTGGAACGGCTACAACTTCGAAGACTCGATCCTGATCTCCGAAAA GGTCGTGGCCGATGACCGCTACACCTCGGTGCACATCGAGGAACTGACGGTCGTTGCCCGTGACACCAAGCTGGGTCCGG AAGAAATCACGCGCGACATCAGCAACCTGGCCGAGACGCAACTGAACCGCCTGGACGATTCCGGCATCACCTACATCGGC GCCGAAGTCAGCGCCGACGACGTGCTGGTCGGCAAGGTCACGCCCAAGGGCGAGACCCAGCTGACGCCGGAAGAAAAGCT GCTGCGCGCCATCTTCGGTGAAAAGGCGTCCGACGTTAAGGACACGTCGCTGCGCGTGCCTTCGGGCATGACCGGCACCG TGATCGACGTGCAGGTGTTCACGCGCGAAGGCATCGTGCGCGACAAGCGCGCCCAGTCCATCATCGACGATGAACTGCGC CGCTATCGCCAGGACCTGAACGACCAGCTGCGCATCGTTGAAAACGACCAGTTCGACCGTATCGAGAAGATGCTGGTCGG CAAGACCGTCAACGGCGGCCCGCGCAAGCTGGCCAAGGGCGCGACGATCACCAAGGCCTACCTGGCCGACCTGGATCGCT GGCAGTGGTTCGACATCCGCCTGGCCGACGAGCCCCACGCCGTGGTGCTGGAGCAGGCCAAGGAATCGCTCGAGCAGAAG CGTCACCAGTTCGACCTGGCCTTCGAAGAGAAGCGCAAGAAGCTGACGCAGGGCGACGAGCTGCCCCCGGGCGTGCTGAA GATGATCAAGGTCTACCTGGCCGTGAAGCGTCGTCTGCAGCCTGGCGACAAGATGGCAGGCCGTCACGGCAACAAGGGCG TGGTCTCGCGCATCACCCCGGTGGAAGACATGCCGCACATGGCTGACGGCACGCCGGCCGACATCGTTCTGAACCCGCTG GGCGTGCCCTCGCGGATGAACGTGGGCCAGGTGCTGGAAGTGCACTTGGGCTGGGCTGCCAAGGGCGTGGGTCACCGCAT CGCCGACATGCTGCGCGACGAGCGCACCGCGCAGGTCAAGAACGTCCGTGCTTACCTGGACAAGGTCTACAACACGACCG GCACCGGCGCGCGCATCGACGAGCTGACCGACGAAGAAGTCATGGAAATGGCCCAGAACCTCAAGAACGGCGTGCCGTTC GCGACGCCCGTCTTCGACGGCGCGACCGAAGAGGAAATCACCAAGATGCTGGAACTGGCCTATCCGGACGACGTCGCCAA GCGCATGGCGCTGACGCCCTCGCGCACGCAGGCGTGGCTGTACGACGGCCGCACCGGCGAGAAGTTCGAGCGTCCGGTCA CCGTCGGCTACATGCACTACCTGAAGCTGCACCACTTGGTCGACGACAAGATGCACGCGCGTTCGACCGGCCCGTACTCG CTCGTGACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGTGGCCAGCGTTTCGGGGAAATGGAAGTGTGGGCGCTGGA AGCCTACGGCGCCGCCTACACCCTGCAGGAAATGCTGACGGTGAAGTCCGACGACATCACCGGCCGCACCAAGGTATACG AAAACATCGTCAAGGGCGATCACGTCATCGATGCCGGCATGCCGGAATCGTTCAACGTGCTGGTCAAGGAAATCCGCTCG TTGGCCCTGGACATGGATTTGGAGCGTAACTAA Protein sequence : MPYSYTEKKRIRKSFAKREDVQNVPFLLATQLQSYLTFLQADTAPSDRVADGLQAAFSSIFPIVSHNGMARLEFVSYVLG EPVFDVKECQQRGLTYASPLRAKVRLVLLDREVSKPTVKEVKEQEVYMGEIPLMTGTGSFVINGTERVIVSQLHRSPGVF FEHDRGKTHSSGKLLFSARVIPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILCKAIGMTPESILANFFDFDNFELKSEG AMMEFVPERWKGEMARFDIADRSGKVIVEKDKRINAKHLRDLAAGGIQRISVPEDFLYGRVLAKNIVDADTGEVIANAND EITESVLGALRAANVHDIQTLYTNDLDRGPYISQTLRTDETADQMAARVAIYRMMRPGEPPTEEAVEALFQRLFYSEETY DLSRVGRMKVNSRLGRGEDITGPMTLTNEDILETIKVLVELRNGRGQIDDIDHLGNRRVRCVGELAENQFRAGLVRVERA VKERLGQAETENLMPHDLINSKPISAAIKEFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTH YGRVCPIETPEGPNIGLINSMALYARLNEYGFLETPYRKIVDGRVSDQIDYLSAIEESHYVIAQANAALDDEGKFVDDLV ACREAGETMLTAPANVHYMDVAPSQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPVVGTGIERTVAVDSGT TVQALRGGLVDHVDAERVVIRVNDEENVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKRGDRVAKGDVLADGASTDLGEL ALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSVHIEELTVVARDTKLGPEEITRDISNLAETQLNRLDDSGITYIG AEVSADDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMTGTVIDVQVFTREGIVRDKRAQSIIDDELR RYRQDLNDQLRIVENDQFDRIEKMLVGKTVNGGPRKLAKGATITKAYLADLDRWQWFDIRLADEPHAVVLEQAKESLEQK RHQFDLAFEEKRKKLTQGDELPPGVLKMIKVYLAVKRRLQPGDKMAGRHGNKGVVSRITPVEDMPHMADGTPADIVLNPL GVPSRMNVGQVLEVHLGWAAKGVGHRIADMLRDERTAQVKNVRAYLDKVYNTTGTGARIDELTDEEVMEMAQNLKNGVPF ATPVFDGATEEEITKMLELAYPDDVAKRMALTPSRTQAWLYDGRTGEKFERPVTVGYMHYLKLHHLVDDKMHARSTGPYS LVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDITGRTKVYENIVKGDHVIDAGMPESFNVLVKEIRS LALDMDLERN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 64 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | CP002695.1.gene18.p0 | Protein | 0.0 | 96 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_008702.1.4609796. | Protein | 0.0 | 77 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_011035.1.6448762. | Protein | 0.0 | 74 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_002516.2.881699.p | Protein | 0.0 | 68 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | CP000675.2.gene392.p | Protein | 0.0 | 66 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | CP001138.1.gene4362. | Protein | 0.0 | 65 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | CP000034.1.gene3741. | Protein | 0.0 | 65 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | CP004022.1.gene2794. | Protein | 0.0 | 65 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | CP001918.1.gene250.p | Protein | 0.0 | 65 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_002695.1.914942.p | Protein | 0.0 | 65 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | CP000647.1.gene4402. | Protein | 0.0 | 65 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_009085.4918494.p0 | Protein | 0.0 | 64 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_011595.7060572.p0 | Protein | 0.0 | 64 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_010410.6003841.p0 | Protein | 0.0 | 64 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_011586.7046027.p0 | Protein | 0.0 | 64 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_010400.5987325.p0 | Protein | 0.0 | 64 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | NC_010611.6233925.p0 | Protein | 0.0 | 64 |
| NH44784_022621 | YP_008029349.1 | DNA-directed RNA polymerase beta subunit | AM180355.1.gene120.p | Protein | 0.0 | 47 |
