Gene Information

Name : NH44784_032401 (NH44784_032401)
Accession : YP_008030322.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma-70 factor, ECF subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3478674 - 3479195 bp
Length : 522 bp
Strand : +
Note : -

DNA sequence :
GTGTCCTCGACCGATACCCTGCCCACCGACACCGTCACGCAGATCTACCGCGAGCACCATGGCTGGCTGTCGGCCTGGCT
GCGCAAGAAGCTCGGCAATTCCTTCGATGCGGCCGACCTCGCCCACGACACGTTCCTGCGTCTGATGGCGGCGCGCGTGA
GGGCAGGCGGCGGCGACGAGCCGCGCGCGCTCCTCACGCACATCGCCAAGGGGCTGGTGGTGGATCACTGGCGCCGCCGC
GCGCTGGAGGACGCCTATCAAGCCGCCGCGGCGCAGCTGCCGGCGCGCGAGGTGCCGTCGCCCGAGGTGCGGGCGCTGAT
CCTGGAAACCCTGTACGCGATCGATGCCACCCTGCGCACCCTGCCGGCCAAGACCCGCGAGATCTTCCTGTTGTCGCAGT
TCGACGGCATGGCGTATGCCGACATCGCGCGCGCGCAACGCGTATCGCTGGCCACGGTCAAGCGCCACATGCAGAAGGCG
CTGACGGCCTGCCTGATCGCCTACCAGGCGGGTCCCGCATGA

Protein sequence :
MSSTDTLPTDTVTQIYREHHGWLSAWLRKKLGNSFDAADLAHDTFLRLMAARVRAGGGDEPRALLTHIAKGLVVDHWRRR
ALEDAYQAAAAQLPAREVPSPEVRALILETLYAIDATLRTLPAKTREIFLLSQFDGMAYADIARAQRVSLATVKRHMQKA
LTACLIAYQAGPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-25 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_032401 YP_008030322.1 RNA polymerase sigma-70 factor, ECF subfamily VFG1049 Protein 9e-26 47