Gene Information

Name : NH44784_040651 (NH44784_040651)
Accession : YP_008031131.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Unknown
Product : Cytochrome c heme lyase subunit CcmF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4341929 - 4343932 bp
Length : 2004 bp
Strand : -
Note : -

DNA sequence :
ATGATCCCGGAGATCGGCCTTTTCAGCCTGATCCTGGCGCTGCTGGCGGCGCTGGTGCAAGGCACGCTGCCGCTGGTCGG
CGCCGCCACGGCCTGGCGGCCGGGCATGGCGGTGGCGCGGCCGGCGGCCGTGGCGCAGTTCGGCCTGGCCACCGTGGCCA
TGGGCTGCCTGGCCTGGTCGTTCCTGCAAAACGACTATTCGGTGCTGTACGTGGCGGCCAACTCGCACGCCGACCTGCCC
GCCGCCTACCGCTTCGCTGCTGTCTGGGGCGGCCACGAAGGCTCGCTGCTGCTGTGGCTGTACCTGCTCAGCGCCTGGAC
CCTGGCGGTAGCGCTGCGCAGCGCGCGCCTGCCGCCGGCCTTCGTCGCCCGGGTGCTGGCGGTGATGGGCTGGATCAGCG
CCGGCTTCCTGCTGTTCCTGCTGTTCCTGTCCAATCCCTTCGAACGCCTGATGCCGCCGGCCATGGCCGGCCGTGATCTC
AACCCGCTGCTGCAGGACCCGGGCATGATCGTGCACCCGCCCATGCTGTACATGGGCTATGTCGGCTTCTCGGTGGCGTT
CGCCTTCGCCATCGCGGCGCTGCTGTCGGGCGAGCTGGACGCCCTGTGGGCGCGCTGGGTGCGGCCGTGGACGCTGGCGG
CCTGGACCTTCCTGACCATCGGCATCCTGCTCGGCAGCGCCTGGGCCTACTACGTGCTGGGCTGGGGTGGCTGGTGGTTC
TGGGACCCGGTCGAGAACGCCTCCTTCATGCCGTGGCTGGCGGGCACCGCGCTGATCCATTCGCTCATCGTCACCGAGCG
GCGCGGCGCCTTCCGCAGCTGGACGGTGCTGCTGGCCATCTGCGCGTTCTCGCTCAGCCTGCTGGGTACCTTCCTGGTGC
GCTCCGGCGTGCTGACCTCGGTGCACGCCTTCGCGGTCGATCCGGGCCGCGGCCTGTACATCCTGGGTTTCATGACCCTG
GTGGTCGGCGGCTCGCTCGCGCTGTACGCCTGGCGCGCGCCCAAGGTCGGCCTGGGCGGCGGTTTCGCCCTGCTGTCGCG
CGAATCGCTGCTGCTGGCCAACAACGTGGTGCTGACCGTGGCGGCCGCCTCGGTGCTGCTGGGCACGCTGTATCCTGTGG
TGCTGGACGTGCTGGACTGGGGCAAGATCTCGATCGGCCCGCCCTACTTCGAGGCCGTGTTCGTGCCGCTGATGACGCCG
GCCATCTTCCTGATGGGCGTCGGCCCGGTGGCGCGCTGGAAGCAGGCCAAGGTGCCCGAGCTGGGCCGGCGCCTGGGCAT
CGCATTCGCGGTCAGCGTGGCCACGGCGGTGCTGCTGCCGCTGGCCATGCCCGGCCCGGCGCGGCTGGGCTCGCCGCTGG
TGGTCCTGGGCCTGTGGCTGGCGGCCTGGTCGGTCGCCAGCGCGGCGGCGCACGCCTGGCAGCGCCTGACCGACGGCGAC
GGCCACTGGCCGCGGCGGCTGGCGCGCCAGCCGCGCGCCTGGTACGGCATGCTGCTGGCCCACGCCGGCATCGGCGTCTT
CATCGCCGGCGCCACCCTGGCCAACGGCTACGAGGTCAAGCAGGAACTGCGGCTGGAGCTGGGCGCCGAGCAGGAGGCTG
GCAGCTACCGCTTCACCTTCACCGCGCTGGCGCCCGCCAGCGGCCCCAACTACAGCGCGCAGCGCGCCGAGTTCCGCGTC
ACCCGCGCCGACGGCCAGCCCGTGACCACGCTGTACCCGGAAAAGCGCCACTACACGGTGCAGGACATGCCGCTGAGCCA
GGCCGCGATCGACAGCGGTTTCTCCCGCGACCTGTTCGTGGCGCTGGGCGAACCGGCCGGCGCCACGGCCTGGACGGTGC
GCATCCAGGTCAAGCCGTTCATGGCGTGGATCTGGTCGGGCTGCCTGCTGATGGCGCTCGGCGGCCTGCTGGCGGCGGGC
GACAGGCGCTACCGCCAGGAAACGGTGCGCGCGCCCCATCCCCGCGCCGGCGCCATGCCGGCCGCCTCGCGCGAGGGCTA
CTGA

Protein sequence :
MIPEIGLFSLILALLAALVQGTLPLVGAATAWRPGMAVARPAAVAQFGLATVAMGCLAWSFLQNDYSVLYVAANSHADLP
AAYRFAAVWGGHEGSLLLWLYLLSAWTLAVALRSARLPPAFVARVLAVMGWISAGFLLFLLFLSNPFERLMPPAMAGRDL
NPLLQDPGMIVHPPMLYMGYVGFSVAFAFAIAALLSGELDALWARWVRPWTLAAWTFLTIGILLGSAWAYYVLGWGGWWF
WDPVENASFMPWLAGTALIHSLIVTERRGAFRSWTVLLAICAFSLSLLGTFLVRSGVLTSVHAFAVDPGRGLYILGFMTL
VVGGSLALYAWRAPKVGLGGGFALLSRESLLLANNVVLTVAAASVLLGTLYPVVLDVLDWGKISIGPPYFEAVFVPLMTP
AIFLMGVGPVARWKQAKVPELGRRLGIAFAVSVATAVLLPLAMPGPARLGSPLVVLGLWLAAWSVASAAAHAWQRLTDGD
GHWPRRLARQPRAWYGMLLAHAGIGVFIAGATLANGYEVKQELRLELGAEQEAGSYRFTFTALAPASGPNYSAQRAEFRV
TRADGQPVTTLYPEKRHYTVQDMPLSQAAIDSGFSRDLFVALGEPAGATAWTVRIQVKPFMAWIWSGCLLMALGGLLAAG
DRRYRQETVRAPHPRAGAMPAASREGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 2e-132 57
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 4e-106 55