Gene Information

Name : NH44784_004291 (NH44784_004291)
Accession : YP_008027535.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma-70 factor, ECF subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 439186 - 439719 bp
Length : 534 bp
Strand : -
Note : -

DNA sequence :

GTGTCCTCCCCCCTCCTTTCGTCTCCGGCCTCCTGCGCCGATGCGCCCGCCACGCAGGTCGACGGCCTGTACCGGGACCA
TCGGCCCTGGCTGTTCGGCTGGCTGCGCCGCAAGCTCGGTTGCGCGCATCGCGCCGAGGACCTGGCGCAGGACGTGTTCG
TGCGCGTGATCCAGGGCCGCAAGACGGTGCGGGCCGGCGAGGCTCGGGCGCTGCTGACCACCATCGCCAAGGGGCTGGTG
ATCGATCATCAGCGCCACGCGGCGCTGGAACATGCCTACCTGGCCTATCTGGCCGACCTGCCCGAGGCCCATGCGCCGTC
GCCCGAGACACAGGCCGAGCAGATGCAGGCCCTGATGCAACTTGACCGCCTGCTCGACAGCCTTCCGCCCAAGGCGCGCT
CGGCCTTCCTGCTGTCGCAGCTGGACGGCCTGACCTATCCCGAAATCGCCCAGAGGCTGGGCGTGTCGCTCAGTTCCGTG
CAGCAGTACATGGTGCGCGCCATGTCGGCCTGTTATGCCGCGCTTTATGACTAG

Protein sequence :

MSSPLLSSPASCADAPATQVDGLYRDHRPWLFGWLRRKLGCAHRAEDLAQDVFVRVIQGRKTVRAGEARALLTTIAKGLV
IDHQRHAALEHAYLAYLADLPEAHAPSPETQAEQMQALMQLDRLLDSLPPKARSAFLLSQLDGLTYPEIAQRLGVSLSSV
QQYMVRAMSACYAALYD

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-27	51

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
NH44784_004291	YP_008027535.1	RNA polymerase sigma-70 factor, ECF subfamily	VFG1049	Protein	6e-28	51