Gene Information

Name : NH44784_057481 (NH44784_057481)
Accession : YP_008032812.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma-70 factor, ECF subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6160829 - 6161356 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGCCCCCGCCTATCCCTCGCCTCCCTCGCTGGAAACCCTCTACCACGATCATCACGGCTGGTTGCGGAGCTGGTT
GCAACGCCGCCTGGGCAACGATTCCGATGCCGCGGATCTGGCGCACGACGCCTTCCTGCGCTTGTTGGCCAAACCGGTGG
GCCGCGAGTTCCACGGCTTTCTCCAGGCTCGCGCCTGGCTGCGCACCGCCGCCAGCGGCCTGTGCGTGGACCTGTGGCGT
CGCCGCGAAATCGAACGCGTCTGGCTGCAAACCCTGGCCGCCCAGCCCGAGCCGCTGGCGCCGTCGCCCGAGGATCGGGC
GCTTGTCGTCGAGGCCCTGCTGCAAATCGGCGCGATGCTCGGCCGCCTGTCGCAAAAGGCGGCGAGCGCCTTCATCATGG
CTCAGGTGGACGGGATGTCCTATCGCGCCATCGCGGCGCAGTTGTCCGTCTCCGAACGCATGGTCAAGAAGTACATCGCC
CAGGCCATGCTGCAATGCGCCTTGATCGAGGCCGGCCGGGGTGACTGA

Protein sequence :
MSAPAYPSPPSLETLYHDHHGWLRSWLQRRLGNDSDAADLAHDAFLRLLAKPVGREFHGFLQARAWLRTAASGLCVDLWR
RREIERVWLQTLAAQPEPLAPSPEDRALVVEALLQIGAMLGRLSQKAASAFIMAQVDGMSYRAIAAQLSVSERMVKKYIA
QAMLQCALIEAGRGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_057481 YP_008032812.1 RNA polymerase sigma-70 factor, ECF subfamily VFG1049 Protein 1e-28 42