Gene Information

Name : NH44784_006681 (NH44784_006681)
Accession : YP_008027774.1
Strain : Achromobacter xylosoxidans NH44784-1996
Genome accession: NC_021285
Putative virulence/resistance : Virulence
Product : RNA polymerase, sigma-24 subunit, ECF subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 710116 - 710643 bp
Length : 528 bp
Strand : -
Note : -

DNA sequence :
ATGTCGTCCACGGAATCCCTGGAACACCGCGAGCTTGGCAGGCTGTACCGCGACCATCACGGCTGGCTGCGCGGCTGGCT
GCTGCGGCGCCTAAACGTGCCGGCCGAGGCCGCCGACCTGGCCCAGGACACCTTCCTGCGCCTGCTGGCGTCGCCGGCAT
CGATGGCGCAATTGCAGGGCGTGCGGCAGCCGCGCAGCTTCCTCGCCACGGTGGCGCAGCGCACGCTGGTCGACCACATC
CGCCGCCAGGTGCTGGAACGCGCCTGGCTCGAAACCCTGGCGCAGCAGCCCGAGGCCAGCGCCATATCGCCCGAGACGCA
GGCCATCCTGCTCGAGACCATCCGCGAGATCGACGCCATGCTGCACGGCCTGGGCGACAAGGTGCGGCGCGCCTTCCTGA
TGTCCCAGCTGGAAGGGGCCAGCTACGCCGAGATCGCCGCCCGCCTGGGCGTGACGGTCAGTTCCATCAAGAAGTACATG
GCGCGCGCCACCGAGCATTGCCTGGTGTACGCGCTGGCCCGGCAGTAG

Protein sequence :
MSSTESLEHRELGRLYRDHHGWLRGWLLRRLNVPAEAADLAQDTFLRLLASPASMAQLQGVRQPRSFLATVAQRTLVDHI
RRQVLERAWLETLAQQPEASAISPETQAILLETIREIDAMLHGLGDKVRRAFLMSQLEGASYAEIAARLGVTVSSIKKYM
ARATEHCLVYALARQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 8e-32 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH44784_006681 YP_008027774.1 RNA polymerase, sigma-24 subunit, ECF subfamily VFG1049 Protein 3e-32 52