Gene Information

Name : BRPE64_CCDS00850 (BRPE64_CCDS00850)
Accession : YP_008039142.1
Strain :
Genome accession: NC_021288
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase ClpV1 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 90018 - 92672 bp
Length : 2655 bp
Strand : -
Note : -

DNA sequence :
ATGACCATGCGCGACTCCACCCAACTGCTTCGCCGTCTGAACCCGCACTGCGCGAGAACGCTGGAAGCGGCCGCGAGTTT
GTGCCAGACGCGCTTATCCGATGAAATCACCGTCGAGCATTGGTTACTAAAGCTGATCGAGGCAGATGACGGCGACATCC
CGGCGATCCTGCGGCACTATGAAATCGATATCGACGCGATCTGGAACGCGCTGCTCGCCGCCATCGATCGCCAGCCGCGC
AATCTGCGCGGCATGCCGTCGCTCTCCATTCAGCTCGCGAGCGCGCTTCAGGATGCGTGGAACCTGGCTTCGCGCGAGGA
CATCGACGGCACGATTCGCTCGGCGCATGTGCTGCGCGCCATCATCGATGCACCGCACGTGATGCGCACGCAGGACACAT
GGCCGCTCTTTTCGCTCACGAGTGCGCAGATCGAGCGGCTGCTGCCGCGCCTCGGCCGCTCGACCTGTGAAAACGCGCCT
GCGCAGGAAGACGAGGAAGAGGACGAAGCTCAGACCGAGCCGCAAAAAGCGACCCCGACATCAACCCCGACGCCGCCCCG
CTCGACCGACGCCGAAGCGCTCGCCCGCTTCGCGATCGATCTGACCGAAAAGGCGCGTCGCGGCGACATCGATCCGGTGT
TCGGACGCGACCACGAGATTCAGCAGATGATCGACGTGCTCGTGCGGCGTCGAAAGAACAATCCGATTCTCGTCGGCGAG
CCGGGCGTCGGCAAGACGGCGCTGGTCGAAGGCCTGGCGCTGCGCATCGCCGATGGCAGCGTGCCTTCGCTTCTGCGCGA
CGTGCGGCTGCTCACGCTCGATCTCGGTTTGCTGCAAGCCGGCGCCGGCGTGAAGGGCGAATTCGAGCAGCGCCTGAAAA
ACGTGATCGACGAAGTGAAGGCGTCGGCGACACCGATCGTGCTGTTCATCGACGAAGCGCACACGCTGATCGGCGCCGGC
AACGCGGCGGGCGGTTCGGATGCGGCGAACCTGCTGAAGCCGGCCCTCGCGCGCGGTGAATTGCGGACCATTGCGGCTAC
CACGTGGTCCGAATACAAGGAGTATTTCGAGCGCGATGCGGCGCTCGAACGACGCTTCCAGATGGTCAAGGTCGACGAGC
CGGACGACCACGCAGCCTGCCTCATGCTGCGCGGACTCGCCACGCGTTACGCACAGCATCACGGCGTGCATATCCGTGAC
GAAGCGCTCGTCGCCGCCGTCAAGTTGTCGCGCCGTTACATTCCCGCACGTCAGTTGCCGGACAAGGCCGTCGATCTGAT
CGACACGGCCGCCGCGCGCGTGCGCATGAGTCTCGATTCGCCGCCGACCGAACTGCAACGCGCCCGCGCGGCGCTTGCGG
CATTGCAACTCGAACAAGCGACGATCGACGCCGACGAACGCGCAGGCATCGACGAAGCCACTGCGCGCCGCGTCGCGCTC
GACGCAGACATTGCGCAAGCCGCCGCCGACGTGAGCGCCATTGAGGCACGCTACGAACACGAGTTGTCTCTGGTGCGCGA
GTTGCTGAAAGCGCGCGACGACGCACACGCCAACCCGCCATCGGGCGAACTCGCGCAAGCCAGGCACGCGCTTGCCGAAG
CGCAGGGCAAAACCCCGCTGATCTTCGCGGACGTCGACGCGCAGGCCATCGCGCGCGTGGTCGCCGAATGGACGGGCGTG
CCGGTCGGCAGTCTCGTCGAAGACGAGTTGTTGAGCCTGCTCACGCTCGAAGATCAATTGCGCGCCCGCGTGATCGCACA
GGACGACGCGCTCGGCATGCTCGCGCAGAGCCTGCGCACCGCGAAGGCGGGCCTCAAGAGCGAGCACGCGCCGCTCGGCG
TGTTCCTGCTGACAGGCACGTCAGGCGTCGGCAAGACGGAAACCGCGCTCGCGCTCGCCGATGCGCTCTTTGGCGGCGAG
GCCGCGCTCACGACGATCAACATGTCGGAGTATCAGGAAGCGCATTCCGTCTCGCAATTGAAGGGCTCGCCGCCCGGCTA
CGTCGGTTACGGGCGCGGCGGCGTGCTCACCGAGGCGCTGCGTCAGCGGCCCTATAGCGTCGTCTTGCTGGACGAAGTGG
AGAAGGCGCATCGCGACGTGCTCGACCTGTTCTATCAGGTGTTCGATCGCGGCTCGATGCGCGACGGCGAAGGCCGCGAG
ATCGACTTTCGCAATTGCGTGATTCTGATGACGTCGAACCTCGGCACCGATCAGATCCACGACGCAACCATCGACACGCC
CGACATCGCGCATGCGGCGCTGCTCGACGCAATCCGCGAACCGCTGCTCGCGCATTTCCAGCCCGCGCTGCTCGCCCGTT
TCCAGACGCTCGTTTATCGGCCGCTGGATGTCGTGGCGCTGGCGTCGATCGTGCGTCTCAAGCTCGCCAAGATCGCTGGC
CGCCTGATGCGTCAGCACGGCGTGACGCTCGTCTGCGACGATTCGCTGGTCTCCTCGCTCGCGCAACTTTGCCTCTCGCG
CGATGCGGGCGCACGCAACATCGACACGTTCCTCGATCAGCAAATCCTGCCGACAATCTCGCGTGAACTTCTCACGCGCA
TGGCGAGCGGCGCGACGCCCGCCGAAATCCGCATTGGAAGCTCGGAGGAAGGGAGTCTGACCATCGACTTCGTGGATCGC
GGCGAACACGCATAA

Protein sequence :
MTMRDSTQLLRRLNPHCARTLEAAASLCQTRLSDEITVEHWLLKLIEADDGDIPAILRHYEIDIDAIWNALLAAIDRQPR
NLRGMPSLSIQLASALQDAWNLASREDIDGTIRSAHVLRAIIDAPHVMRTQDTWPLFSLTSAQIERLLPRLGRSTCENAP
AQEDEEEDEAQTEPQKATPTSTPTPPRSTDAEALARFAIDLTEKARRGDIDPVFGRDHEIQQMIDVLVRRRKNNPILVGE
PGVGKTALVEGLALRIADGSVPSLLRDVRLLTLDLGLLQAGAGVKGEFEQRLKNVIDEVKASATPIVLFIDEAHTLIGAG
NAAGGSDAANLLKPALARGELRTIAATTWSEYKEYFERDAALERRFQMVKVDEPDDHAACLMLRGLATRYAQHHGVHIRD
EALVAAVKLSRRYIPARQLPDKAVDLIDTAAARVRMSLDSPPTELQRARAALAALQLEQATIDADERAGIDEATARRVAL
DADIAQAAADVSAIEARYEHELSLVRELLKARDDAHANPPSGELAQARHALAEAQGKTPLIFADVDAQAIARVVAEWTGV
PVGSLVEDELLSLLTLEDQLRARVIAQDDALGMLAQSLRTAKAGLKSEHAPLGVFLLTGTSGVGKTETALALADALFGGE
AALTTINMSEYQEAHSVSQLKGSPPGYVGYGRGGVLTEALRQRPYSVVLLDEVEKAHRDVLDLFYQVFDRGSMRDGEGRE
IDFRNCVILMTSNLGTDQIHDATIDTPDIAHAALLDAIREPLLAHFQPALLARFQTLVYRPLDVVALASIVRLKLAKIAG
RLMRQHGVTLVCDDSLVSSLAQLCLSRDAGARNIDTFLDQQILPTISRELLTRMASGATPAEIRIGSSEEGSLTIDFVDR
GEHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-138 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BRPE64_CCDS00850 YP_008039142.1 type VI secretion ATPase ClpV1 family VFG2076 Protein 4e-145 46
BRPE64_CCDS00850 YP_008039142.1 type VI secretion ATPase ClpV1 family VFG2084 Protein 5e-124 43