Gene Information

Name : AHML_07345 (AHML_07345)
Accession : YP_008042600.1
Strain : Aeromonas hydrophila ML09-119
Genome accession: NC_021290
Putative virulence/resistance : Virulence
Product : RTX toxin transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1620670 - 1622829 bp
Length : 2160 bp
Strand : -
Note : COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

DNA sequence :
ATGCAGCAGACCCACTCCGCCGACAGCGCCCCTGTCGCCAATGGCGCCCTCGCCGCCCTCACCCAGGCGGCCCATCAGCT
GATGCTGACGGCCGATGCCGAACAGCTGGCCCACGCCCTGGGTTGCGATCTGGCACCGCCCGACCTGACGGTGCGGGAAG
CCGCTGCCCATCTTGGCCTGCGCAGCGCCCTGTCGCAGGGGCCGGGCTGCCCGCTCGCGGCGCTGCCGCTGCCGGCCTTG
CTCAAGCGGGATGGCCGCTGGTACACCATCACCGCCATCACGCCAGAGGGCTGGCAGCTGTTTGATCCCGCCAGCGGCAG
CAGCAGGCTGCAGCCGCTGCCCAGCCAGGCCGAGGCGGCGCAGTGGCACTTTCTGTTGCTGGCCCAGCAGGATCTCACCC
CGGCCGAGGTCAAATTCGGGCTGAGCTGGTTCAGCCCGGCGGTGCTGCGCCAGCAGAAACAGCTGCGGGACGTCTTCTGT
TTCGCCATCTTGCTGCAGCTCATCGCCCTCGCCAGCCCGCTGCTGTTCGAGAACATCATCGACAAGGTGCTGGTGGGGCG
CAGCCTCGGCAGCCTGCACGTGCTGGCCCTGGCCATGGTGGCACTGGCCTGCGCCGAGCCGCTCTACGGCTTTCTGCGCG
GCCAGGTGTTCAGTCACCTGGCCAACCAGGTCAATGCCGAGCTCTCCGGCAAGCTCTATCGCCATCTGGTCGGCCTGCCC
ATCGGTTATTTCAAGGCCCGCCAGACCGGCCAGATCATCGCCCGGGTCAAGGAGATGGCCCAGATCCGCCAGTTCCTCAC
CGGCTCGACCCTGATGCTGGTGCTGGATCTGCTGTTCATCCTGCTGTTCGTCGGGGTCATGTTTCACTACGCCCCGCGCC
TGACCGCCTGCGTGTTGGGCTCGCTGCTGATCTACTTCCTGCTCTGGCTGTTGATAGGGCCGCTGGTGCGCAGAAAGGTC
GAGGCGGAGTATCAAGCGGATGCCGATGCCACCAGCTTTCTGACCGAAGCGGTCACCGGCATCGAAACCATCAAGACCAC
GGCCACCGAACGCCGCTTCTACCAGGAGTGGCAACGCCTGCTGGCACGCCAGCTCAGGCGGGGCTTTCAGGCCAAGAAGG
TGGGGCTGGCGGCCGGCCAGGGTATCGATCTGGTGCAAAAACTCACCGCCGCCCTGCTGCTCTGGCTCGGGGTCGGCGAG
GTACTGAACGGTCGCATGAGCCCGGGGGAGCTGGTCGCCTTCAACATGCTGGCCGGCCACGTCACCCAGCCGGTGCTGCG
CCTGGCCCAGGTGTGGCAGGATTTTCAGCACACCCTGATCGCCCTGCGCCGGGTCGGCGACATCCTCGACGAGACGCCGG
AGCATGGCAACAACGGGCTCGCCTCCGTGCCCGCCCTCCAGGGCGCCATCGAGTTTCGTCACATCCGCTTTCGTTACCAG
CCGGATGCCCCCGAGGTGCTGGCCAACCTCTCCCTCACCATTGAACCGGGGCAGTTCATCGGCATCACGGGTCCGTCCGG
CTGCGGCAAGAGCACCCTGACCCGTTTGCTGCAGCGGCTCTATGTGCCCCAGCACGGCCAGGTACTGGTGGACAACATGG
ATCTCGCCATCGCCGACCCCGTCTCCCTGCGCCGCAACATGAGCGTGGTGCTGCAGGAGAGCGTGCTGTTCTCCGGCACC
ATCGCCGACAACATCCGCATCTGCCGCCCCGATGCCAGCCAGGCCGAGCTGGAGCAGGCGGCGCAGCTGGCCGGTGCCCT
CGCCTTCATTCGCGAGCTGCCCCAGGGCTTCGAGCAACAGGTGGGAGAGAAGGGAGCCCGCTTGTCGGGCGGGCAGCGTC
AGCGCATCGCCCTGGCCCGCGCCCTGCTGGTCAACCCCAGGATCCTGCTGCTCGACGAGGCCACCTCGGCCCTCGACTAT
GAGTCGGAAGCGGCCATCATGGCCAACATGGCAGCCATCCGCCGCGACCGCACCCTCATCAGCATCGCTCATCGCCTCAA
TACCCTGCGCGAGGCGGACCGTATCCTGGTGATGGAGGCAGGGCAGATAGTGGAGTCGGGCAGCCATGATGAACTGCTGG
CCCGCGAGGGGCTCTATGCCAGGCTGTGGCGTCAGCAGACCGGTGCTGAGACGAGTCAGACCCTGACTCACACTGGCTAG

Protein sequence :
MQQTHSADSAPVANGALAALTQAAHQLMLTADAEQLAHALGCDLAPPDLTVREAAAHLGLRSALSQGPGCPLAALPLPAL
LKRDGRWYTITAITPEGWQLFDPASGSSRLQPLPSQAEAAQWHFLLLAQQDLTPAEVKFGLSWFSPAVLRQQKQLRDVFC
FAILLQLIALASPLLFENIIDKVLVGRSLGSLHVLALAMVALACAEPLYGFLRGQVFSHLANQVNAELSGKLYRHLVGLP
IGYFKARQTGQIIARVKEMAQIRQFLTGSTLMLVLDLLFILLFVGVMFHYAPRLTACVLGSLLIYFLLWLLIGPLVRRKV
EAEYQADADATSFLTEAVTGIETIKTTATERRFYQEWQRLLARQLRRGFQAKKVGLAAGQGIDLVQKLTAALLLWLGVGE
VLNGRMSPGELVAFNMLAGHVTQPVLRLAQVWQDFQHTLIALRRVGDILDETPEHGNNGLASVPALQGAIEFRHIRFRYQ
PDAPEVLANLSLTIEPGQFIGITGPSGCGKSTLTRLLQRLYVPQHGQVLVDNMDLAIADPVSLRRNMSVVLQESVLFSGT
IADNIRICRPDASQAELEQAAQLAGALAFIRELPQGFEQQVGEKGARLSGGQRQRIALARALLVNPRILLLDEATSALDY
ESEAAIMANMAAIRRDRTLISIAHRLNTLREADRILVMEAGQIVESGSHDELLAREGLYARLWRQQTGAETSQTLTHTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 3e-112 46
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 3e-112 46
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 3e-112 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHML_07345 YP_008042600.1 RTX toxin transporter VFG1269 Protein 2e-113 47
AHML_07345 YP_008042600.1 RTX toxin transporter VFG0841 Protein 3e-108 47
AHML_07345 YP_008042600.1 RTX toxin transporter VFG1557 Protein 2e-112 46
AHML_07345 YP_008042600.1 RTX toxin transporter VFG1501 Protein 2e-112 46
AHML_07345 YP_008042600.1 RTX toxin transporter VFG0907 Protein 1e-112 46