Gene Information

Name : AHML_07565 (AHML_07565)
Accession : YP_008042644.1
Strain : Aeromonas hydrophila ML09-119
Genome accession: NC_021290
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1676569 - 1678524 bp
Length : 1956 bp
Strand : +
Note : COG1138 Cytochrome c biogenesis factor

DNA sequence :
ATGATCCCTGAATTGGGACAGTTTTCACTGATCCTGGCCTTCGCCACCGCCCTGCTGCTGGGCAGCTATCCGCTGCTCGG
GGCCAAATGGGGGCGCCTTGGCATGATGTCGGCGGCCCGCCCGCTCGCCTATGCCCAGTTCCTGCTGCTGTTGCTGTCAT
TCCTGTGCCTGACCTGGGCCTTCATCGACAACGACTTTACCGTGCAGTACGTGGCCACCAACTCCAACAGCCTGCTGCCG
CTGGCCTATCGCATCTCCGCGGTGTGGGGCGCCCACGAGGGTTCCTTGCTGCTGTGGGTGCTGACCCTGGGGGGCTGGAC
TGCGGCCGTCGCCATGTTCAGCCGTCGCCTGCCGCTCGACGCGGTGGCGCGGGTGCTCGGTGTGCTCGGCCTCATCTCGG
TCGGTTTTACCGCCTTCGTGCTGTTTACCTCCGACCCCTTCATTCGTACCTTGCCCTACTTCCCGGTGGATGGGCGCGAC
CTCAACCCGCTGTTGCAGGATCCCGGTCTCATTTTCCACCCGCCGATGCTCTACATGGGCTATGTGGGCTTCTCGGTGGC
CTTCGCCTTTGCCATCGCGTCCTTGATGACTGGCCGGCTCGATGCCACCTGGGCGCGCTGGTCGCGTCCCTGGACCATGG
CGGCCTGGGTCTTCCTCACCCTGGGTATCGTGCTCGGCTCCTGGTGGGCCTATTACGAGCTCGGTTGGGGTGGCTGGTGG
TTCTGGGATCCGGTAGAAAACGCCTCCTTCATGCCCTGGCTGGCCGGTACCGCCCTGCTGCACTCGCTGGCGGTGAGTGA
AAAACGCGCCACCTTCAAGGCCTGGACCGTGCTGCTGGCGCTCTCCGCCTTCTCTCTGAGCCTGCTGGGTACCTTCCTGG
TGCGCTCCGGCGTGCTGGTGTCGGTGCATGCGTTTGCCTCCGACCCGACCCGCGGCCTGTTCATTCTAGGCTTCCTGCTG
GCGGTAATCGGTTCATCCTTGCTGCTGTTTGCCTTCAAGGGCTCCCAGGTGAGAAGCCACGGCAAGCACGAACTGTGGAG
CCGCGAGACCCTGCTGCTGTGCAACAACATCATGCTGGTGGCGGGTCTGCTGACCGTGCTGCTCGGCACCCTGCTGCCGC
TGGTGCACAAGGAGCTGGGGTTGGGCAGCATCTCCATCGGTACTCCCTTCTTCAACCACATCTACAGCTGGCTGATCATT
CCTTTCGCCCTGTTGCTGGGGGTCGGCCCGCTGTTTCGCTGGCGCCGCCAGGAGCTGGGCGAGCTCAAGGGCAAGGTGGT
GCTGGCGCTGGTATTGAGCCTGGCCGCCGCCATTTTGCTGCCGCTGCTGCTGGCTGAGGAGTTCAAGCCCTGGGCTGCGC
TCGGTATCGGGCTTGGCGCCTGGATCATCGTGACCAGCGTGCAGGAGACCTGGGTGCGTGCCACCCACAAGCACAGCTTC
GCCGTCGGCGTGCGCCGCCTTGGCAACAGCCACTGGGCCATGATCCTGGGCCACGTGGGCCTCGCGGTCAGCATCATCGG
CATCGCCTGTACCCAGAACTACAGCATCGAGAAGGATCTGCGGATGCAGGCCGGTGATCGGGTCCAGTTTGCCGACTACG
AGTTTGTCTTCACCGGCATCAAGGAGAAGAACGGCCCCAACTACGACGGCTTCAAGGGCGTGCTGGAAGTACACAAGGAC
GGCAAGCAGGTCGCCCTGCTCAAGCCGGAGAAACGCATGTACAAGGTGACCCGGATGCCGATGACCGAAGCGGCCATCGA
TGCCGGCTTCACCCGGGATCTCTACGCGGCGCTCGGCGAGCAGCTCGATAGCGGCGCCTGGGCGGTGCGGATCTACTACA
AACCCTTCGTGCGCTGGATCTGGTTCGGCGGCGTCTTCATGGCCATCGGCGGCGTGCTGGCGATGCTGGACAAGCGCTAC
CGTTTCGGTCGCCGTGACGAGGAGGCCAAAGCATGA

Protein sequence :
MIPELGQFSLILAFATALLLGSYPLLGAKWGRLGMMSAARPLAYAQFLLLLLSFLCLTWAFIDNDFTVQYVATNSNSLLP
LAYRISAVWGAHEGSLLLWVLTLGGWTAAVAMFSRRLPLDAVARVLGVLGLISVGFTAFVLFTSDPFIRTLPYFPVDGRD
LNPLLQDPGLIFHPPMLYMGYVGFSVAFAFAIASLMTGRLDATWARWSRPWTMAAWVFLTLGIVLGSWWAYYELGWGGWW
FWDPVENASFMPWLAGTALLHSLAVSEKRATFKAWTVLLALSAFSLSLLGTFLVRSGVLVSVHAFASDPTRGLFILGFLL
AVIGSSLLLFAFKGSQVRSHGKHELWSRETLLLCNNIMLVAGLLTVLLGTLLPLVHKELGLGSISIGTPFFNHIYSWLII
PFALLLGVGPLFRWRRQELGELKGKVVLALVLSLAAAILLPLLLAEEFKPWAALGIGLGAWIIVTSVQETWVRATHKHSF
AVGVRRLGNSHWAMILGHVGLAVSIIGIACTQNYSIEKDLRMQAGDRVQFADYEFVFTGIKEKNGPNYDGFKGVLEVHKD
GKQVALLKPEKRMYKVTRMPMTEAAIDAGFTRDLYAALGEQLDSGAWAVRIYYKPFVRWIWFGGVFMAIGGVLAMLDKRY
RFGRRDEEAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 2e-147 62
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 1e-124 54