|
Name : L483_13510 (L483_13510) Accession : YP_008094487.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : - COG ID : - EC number : - Position : 2875138 - 2875668 bp Length : 531 bp Strand : - Note : Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGCCTGACTCCCTCCCCTCGACCGGACACAGCCTGGCCGGCCTGTACGCCAACCACCATGGCTGGCTGGTGAACTGGCT GCGTGGCCGCCTGCAGTGTTCGCAGCAGGCCGCCGACCTGGCCCAGGACACGTTCGTGCGTGTACTGCTGGCCGACCGCA GCCAGCCTTTGCTCAGTGAACTGCGCGAGCCACGCCACTTTCTGGTCACCATGGCCAGGCGCGTGATGATTGACAGCTTC CGCCGCCGGGCACTGGAGCAGGCCTACCTGCAACTGTTGGCCGAACAGCCCGAACAGTATGCGATTTCCCCCGAGGAACG CTGGATGCTGGTAGAAACCCTGCAAGCACTGGATGCGATGCTTGAAGGCCTGGGCAAGAAGGTCAAGCAGGCGTTTCTGT TATCGCAGTTGCGTGGCCTGGGCTACAAGGACATCGCCGTCCAGATGGGCGTATCAGTCAGTTCGGTCACCAAGTACATT GCCCGCGCCACCGAGCACTGCTTGCTGTTTGCCCTGGAACACGCCCAGTGA Protein sequence : MPDSLPSTGHSLAGLYANHHGWLVNWLRGRLQCSQQAADLAQDTFVRVLLADRSQPLLSELREPRHFLVTMARRVMIDSF RRRALEQAYLQLLAEQPEQYAISPEERWMLVETLQALDAMLEGLGKKVKQAFLLSQLRGLGYKDIAVQMGVSVSSVTKYI ARATEHCLLFALEHAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 1e-35 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| L483_13510 | YP_008094487.1 | RNA polymerase sigma factor | VFG1049 | Protein | 5e-36 | 55 |
