Gene Information

Name : L483_16555 (L483_16555)
Accession : YP_008095090.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : peptide ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3487982 - 3488959 bp
Length : 978 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGCTCATCCTGCGCAAAGACCCGCCGCTGCCCCCTGAAGTCCTCGAAGAAGCCGCCGAATGGCTGATGCGCCTGAGTGA
AAACGACCTGAGCGACAGCGAACGCGCCGAGTGGGAACACTGGAAGGTCAGCAGCCCCGAGCGTGATCGCGCCTGGGCTC
GGGCGCAGTTGCTGCAAAGCAAACTGGGCGGCCTGCCACCTTCGCTGGCGATGTCAGCGCTGGATCGACCGAGCAACCCG
GAACGCCGTGCGGCCCTCGGCAAGCTGGCATTGTTGCTGGCGGTGATGCCGGTAGGCTGGGGCAGTTGGAAACTGGCGCA
ATCGCAGCAGTGGACGGCCGATTACCGCACCGCCGTCGGCGAACGACGCGAGTGGACCCTGGCCGATGGCTCTCGCATCA
CCCTGAACACCAATACCGCCGTCGATGTGCTGTTCGACAGCCAGCAGCGCCTGATCCGCCTGCGCGAAGGCGAGATCCTG
GTGCAGACCGCCACGGACAATTCCCCCCTGGCCCGGCCCTTCCTGGTCAGTACCGCACAGGGCCACATGCAGGCCCTGGG
CACGCGTTTCATCGTCCGCCAATTGAGCCCGTTCACCCACCTTGCGGTATTGGAAGGCGCCGTCAAAGTGGTGCTGGCCG
AGAACCGCCAGGCCGAGTCCCTGATCGTCAATGCCGGACAACGCATGGCATTCACCGCACAGGCCTTTGGCGCGGCGAAC
CCCACTGACCGTAACGCCAGCGCCTGGACCCAGGGCATGCTGATGGCGGACAAGATGCGCCTGGCGGATTTCGTCGCTGA
GGTCACCCGCTATCGCCACGGCTTCGTCAGGTTCGACCCGGCGATTGCCGACCTGCGCATTTCCGGCGCTTTTCCGATCA
GCGACAGCCAGCGCACCTTGAACATGCTGGTGCAAACCTACCCGGTCACCGCCACCGCTCATCTGCGAGGGTACTGGGTC
ACCTTGTCCCCGGCCTGA

Protein sequence : 
MLILRKDPPLPPEVLEEAAEWLMRLSENDLSDSERAEWEHWKVSSPERDRAWARAQLLQSKLGGLPPSLAMSALDRPSNP
ERRAALGKLALLLAVMPVGWGSWKLAQSQQWTADYRTAVGERREWTLADGSRITLNTNTAVDVLFDSQQRLIRLREGEIL
VQTATDNSPLARPFLVSTAQGHMQALGTRFIVRQLSPFTHLAVLEGAVKVVLAENRQAESLIVNAGQRMAFTAQAFGAAN
PTDRNASAWTQGMLMADKMRLADFVAEVTRYRHGFVRFDPAIADLRISGAFPISDSQRTLNMLVQTYPVTATAHLRGYWV
TLSPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecR AAL08457.1 FecR Virulence SRL Protein 7e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_16555 YP_008095090.1 peptide ABC transporter substrate-binding protein VFG1048 Protein 4e-44 42