|
Name : L483_18755 (L483_18755) Accession : YP_008095528.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : - COG ID : - EC number : - Position : 3964563 - 3965075 bp Length : 513 bp Strand : - Note : Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGATCGACGTCGCGCCGCCACCGGAGCCTAGCCTGCCTGCCCTGTACCGGGAGCACCGCAGCTGGCTTGAAACCTGGCT ACGCCGGCGCCTGGGCAATGCCTGGGATGCCGCCGACCTCAGCCAGGATACCTTCCTGCGGGTGCTGGCCAGTGCACAGC CACTGGCAGACATTCGTGAGCCACGCGCCTACCTGCTCACGGTGGGCAAGCGGCTGCTGAGCAACTTCCACCAGCGGCGC AGCCTGGAGCGGGCCTACCTTGATGCCTTGGCGCATCTGCCCGAGCAGCACGTGCCCTCGCCCGAGCAGCGCTGGCTGTT ACTGGAAACCCTGCAAGCCCTGGATGAGCTGCTTGATGGCCTGAAGGCGCCGGTCCGCAAGGCTTTTCTCTGGAGCCAGC TCGAAGGCCTGGGCTATGCCGAGATCGGCACGCGCCTGGGCGTGTGCGAGCGCTCCGTCAAACGCTACATGGCGCAGGCT TACGAACATTGCCTGCTGGCCGAGTTGCAATGA Protein sequence : MIDVAPPPEPSLPALYREHRSWLETWLRRRLGNAWDAADLSQDTFLRVLASAQPLADIREPRAYLLTVGKRLLSNFHQRR SLERAYLDALAHLPEQHVPSPEQRWLLLETLQALDELLDGLKAPVRKAFLWSQLEGLGYAEIGTRLGVCERSVKRYMAQA YEHCLLAELQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 8e-34 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| L483_18755 | YP_008095528.1 | RNA polymerase sigma factor | VFG1049 | Protein | 3e-34 | 50 |
