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Name : L483_23070 (L483_23070) Accession : YP_008096376.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Virulence Product : lytic transglycosylase Function : - COG functional category : - COG ID : - EC number : - Position : 4821316 - 4822746 bp Length : 1431 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGTCTTCCCGTAGCCGCAGAACCGCTCATTCAGTCGCCTTGACGCGCCTGGCCCAAATCAGTGCGCTGGCGCTGGCCGC CACCCTGGTGGGCTGCCAGAGCACCCGTCAGCTTGACGACTCCGAAAGCGTTCGCGCGCACAATTACCAGGCGCGGATCA AGCACAAGCCTGCACCGCTGCTGGTCAAGCCGGTTGAGAAAACGCCGCAGGACGTTTGGGAGCGCATGCGCCAGGGCTTC GCCCTGCAGGACAGCATCGACGTCAACCCGCGCATCGAGCAGCAGCGCCTGTGGTTCGCCAGCAACCCCACCTTCATCGA AAGCGCCGGTGAGCGCGGCAGCCTCTACCTGCACTACATTGTCGAGCGTCTTGAAGAGCGCGACATGCCGCTGGAGCTGG CGCTGCTGCCCGCCATCGAGAGCGCCTACAACCCGATGGCCTATTCACGTGCCAGCGCTGCCGGCATGTGGCAGTTCATG CCAGCGACAGGTCGCCACTTCAACCTGCGCCAGACCAACTTCTACGATGGCCGCCGCGATATCACCGCGTCGACCAACGC AGCACTGGATTACCTGACCCGCCTGCACGACATGTTCAACGGCGACTGGCTGCTGGCCCTGGCCGCTTACAACGCCGGCG AAGGCACGGTCAGCCGCGCCATGGAACGCAACGAAAGGCTCGGCCTGCCAACCGACTACTGGAACCTGCCGCTGCCGCAG GAAACCCGCGACTATGTGCCCAAGCTGCTGGCCTTGTCGCAGGTGGTACTCACGCCTGAAGCCTATGGCGTCAACCTGAA CCCGATCGCCAACGAGCCCTACTTCGAAGCGGTAGCCATCAATGATCGCCTGGACCTGTCGCGGGTAGCGGCCTTTGCCA ATATCGACGAAGACGAGCTGATCCAGCTCAACCCGGCCTTCAAGAAGCGCATGACCGTGGACGGCCCGCAGCAGCTGTTG GTACCAACCGCCAAAGCGCAGTTGCTGAGCGACAGCCTGTCCAACCTCAAGCCCGAGCAACTGGTCAGCCTGCAACCAAA CAAGGCCGTGTTCGCCCGCGCTGTGGCCGAAGCCAAGGCGCCGGTAGCGGCACGCAGCTACCGGGTCAAGCGTGGCGACA ACCTGGGCGCCATCGCCAAGGCCAACCGCGTTTCGGTCAGTGACATCAAGCGCTGGAACCGCCTGTCCGGCAACAGCCTG CGTGCCGGCCAGGTGCTGGCCCTGCGCGGTGGCAATGGGCCGAGCGCCGCCGGCAATCGGGTTGCTGCTTCCGGCAAGCG CTCTACCCAGTACAAAGTACGCAAGGGCGACTCGCTGTACCTGGTGGCCAAGCGTTTCAACGTTGAGATGCAGCACCTCA AGCGCTGGAACCCGCGCAGCGGGCATGCATTGAAGCCCGGGCAGACACTGACCGTTTACTTGTCGCATTGA Protein sequence : MSSRSRRTAHSVALTRLAQISALALAATLVGCQSTRQLDDSESVRAHNYQARIKHKPAPLLVKPVEKTPQDVWERMRQGF ALQDSIDVNPRIEQQRLWFASNPTFIESAGERGSLYLHYIVERLEERDMPLELALLPAIESAYNPMAYSRASAAGMWQFM PATGRHFNLRQTNFYDGRRDITASTNAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAMERNERLGLPTDYWNLPLPQ ETRDYVPKLLALSQVVLTPEAYGVNLNPIANEPYFEAVAINDRLDLSRVAAFANIDEDELIQLNPAFKKRMTVDGPQQLL VPTAKAQLLSDSLSNLKPEQLVSLQPNKAVFARAVAEAKAPVAARSYRVKRGDNLGAIAKANRVSVSDIKRWNRLSGNSL RAGQVLALRGGNGPSAAGNRVAASGKRSTQYKVRKGDSLYLVAKRFNVEMQHLKRWNPRSGHALKPGQTLTVYLSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpH | NP_791205.1 | membrane-bound lytic murein transglycosylase D | Virulence | Hrp PAI | Protein | 4e-81 | 52 |
| unnamed | AAF71498.1 | unknown | Not tested | Hrp PAI | Protein | 3e-81 | 52 |
