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Name : L483_23925 (L483_23925) Accession : YP_008096546.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 5062770 - 5064758 bp Length : 1989 bp Strand : - Note : cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAATGCGGCGCTGGTTATACCCGAACTCGGCCAGTTGGCGATGATCCTGGCCATCTGCTTTGCCACCGTGCAGGCCAG TGTGCCGCTGCTTGGCGCGTGGCGTGGCGACAGCCTGTGGATGAGCCTGGCACGGCCGGCGGCCTGGGGGCAATTCGCCT TCCTGGCTTTTGCCTTCGCCTGTTTGACCCATGCCTTCATGACCGACAACTTCTCGGTCGCCTATGTGGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAATTCAGCGCCGTGTGGGGCGCCCACGAGGGTTCGCTGCTGCTGTGGGCGCTGAT CCTGGGCGGCTGGACCTTTGCCGTGTCGGTGTTTTCGCGGCAGTTGCCGCAGGTGATGCTGGCCCGCGTGCTGGCAGTGA TGGGCATGATCAGCGTCGGCTTCCTGAGCTTTTTGATCATTACTTCCAACCCATTCCAGCGCCTGCTGCCGCAAGTGCCC ACCGACGGTCGCGATCTAAACCCGTTGCTGCAGGACTTCGGCCTGATCGTTCACCCGCCGATGCTGTACATGGGCTACGT GGGCTTCTCGGTGGCCTTTGCCTTCGCCATTGCCGCCTTGCTCGGCGGCCGTCTGGACGCTGCCTGGGCGCGCTGGTCGC GGCCCTGGACCATCGTCGCCTGGGCTTTCCTGGGGGTCGGCATCACCCTGGGCTCCTGGTGGGCCTACTATGAGCTGGGC TGGGGTGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCTTGGCTGGTGGGCACGGCGCTGATCCACTC GCTGGCGGTGACTGAAAAGCGCGGGGTGTTCAAGAGCTGGACCGTGCTGTTGGCAATTGCCGCATTCTCGCTGAGCCTGC TGGGTACTTTCCTGGTGCGTTCCGGCGTGCTGACCTCGGTGCACGCATTTGCTGCCGACCCATCGCGGGGCATTTTCATC CTGTTCTTCCTGTTGTTCGTGGTCGGTGGTTCGCTGACCCTGTTCGCCCTGCGCGCACCGGTGGTCAAGAGCCAGGTCGG TTTCGCCCTGTGGTCGCGCGAGACGCTGCTGCTGGCCAACAACCTGGTGCTGGTGGTGGCCGCATCGATGATTCTGCTCG GCACGCTGTACCCGCTGGTGCTTGATGCCCTGACCGGGGCCAAGCTGTCGGTGGGGCCGCCCTATTTCGATGCCTTGTTC CTGCCGCTGATGGCACTGCTGATGGTGGTAATGAGCGTGGGCGTGGTGGTGCGCTGGAAGGACACCCCGGGCAAATGGCT GGTCAGCATGATGACCCCGGTGCTGATCGGCAGTGCCATTCTTGCTCCGGTTGCCGGTTTTATCGTTGACGACTTCGACT GGCCGACCCTGACCGCCTTCGCCCTGGCTGCCTGGGTGGTACTTGGCGGGCTGCGCGACATCCTCGACAAGACCCGTCAC AAAGGCCTGCTCAAGGGCCTGCCTGGCCTGGGCCGCAGCTACTGGGGCATGCAACTGGCACACCTGGGCCTGGCGGTGTG TGCGCTGGGTGTGGTGCTGTCGAGCAACAACAGCGCCGAACGCGACCTGCGCATGGCCCCGGGCGAAAGCGTGGAGCTGG GTGGCTACCAGTTCCTGTTCCAGGGCGCCAAGCACTTCGAAGGGCCGAACTTCATCTCCGACAAGGGTACGGTGGTCGTC AGCCGTGGTGGCCGTGAAGTGACGACCTTGCACCCGGAAAAGCGCCTGTACACCGTGCAGCAATCGATGATGACGGAAGC CGGCATCGACGCCGGCTTTACCCGCGACCTTTACGTTGCCCTTGGCGAGCCGCTTGAGAACGGCGCCTGGGCCGTGCGTG TGCACATCAAGCCTTATGTCCGCTGGATCTGGCTGGGCGGTCTGCTGACCGGCCTGGGCGGGTTGCTGGCGGCACTCGAC CGGCGCTACCGCGTCAAGGTCAAGACCCGGGTGCGTGAGGCCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MNAALVIPELGQLAMILAICFATVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFI LFFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF LPLMALLMVVMSVGVVVRWKDTPGKWLVSMMTPVLIGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDILDKTRH KGLLKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYQFLFQGAKHFEGPNFISDKGTVVV SRGGREVTTLHPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALD RRYRVKVKTRVREALGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-109 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-103 | 56 |
