Gene Information

Name : L483_23940 (L483_23940)
Accession : YP_008096549.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : heme ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5065380 - 5066147 bp
Length : 768 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCATG
GCTGGCCGGCGCTGCCGTGCTCCTGCTGCTGGTCGGTATCACCTGGGGCCTGGCGTTTGCCCCCCAGGACTACCAGCAAG
GCAACAGCTTCCGCATCATCTACATTCATGTGCCGGCGGCGATGCTGGCGCAATCCTGCTACGTGCTGCTGGCCGTCGCC
GGTGTGGTGGGGCTGGTGTGGAAGATGAAACTGGCCGACGTCGCCCTGCAATGTGCCGCGCCCATCGGCGCCTGGATGAC
CGCCGTGGCGCTGGTTACCGGCGCTATCTGGGGCAAGCCGACCTGGGGCAGCTGGTGGGTGTGGGACGCCCGCCTTACGT
CCATGCTCATTCTGCTGTTCCTGTACTTCGGCATTATTGCGCTGGGCCAGGCGATCAGTAATCGTGACAGTGCGGCCAAG
GCCTGCGCGGTGCTGGCGATTGTCGGCGTAGTCAACATCCCGATCATCAAGTACTCGGTGGAGTGGTGGAACACCCTGCA
CCAGGGCGCCACCTTCACCCTCACCGAAAAGCCGGCGATGCCCGCCGAAATGTGGCTGCCGTTGCTGTGCACGGCGTTGG
GTTTCTACTGTTTCTTCGGCGCCGTGCTGTTGCTACGCATGCGCCTTGAAGTGCTCAAGCGCGAGGCGCGCGCCAGTTGG
GTCAAGGATGAAGTGTTGAACAGCCTGGGGCGGAGGGCCGCACAATGA

Protein sequence :
MKISWTWFHKLGSPKWFYAISGRMLPWLAGAAVLLLLVGITWGLAFAPQDYQQGNSFRIIYIHVPAAMLAQSCYVLLAVA
GVVGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGIIALGQAISNRDSAAK
ACAVLAIVGVVNIPIIKYSVEWWNTLHQGATFTLTEKPAMPAEMWLPLLCTALGFYCFFGAVLLLRMRLEVLKREARASW
VKDEVLNSLGRRAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_23940 YP_008096549.1 heme ABC transporter permease VFG1856 Protein 2e-43 50