Gene Information

Name : L483_27410 (L483_27410)
Accession : YP_008097227.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : amino acid ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5808466 - 5810790 bp
Length : 2325 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCCGTTGCGCCACAGCCCGTTCGTCCACGCCCTGCTGTTCACCACCACCCTCGGCCTGGCCACGCCTGCCGCCTATGC
CGAAACCCGCAGCTACCATATCGCCGCCGGCTCGCTTGAAGACGCCCTCAACCAGTTTGGCCGCGAAAGCGGGGCGCTGA
TCTCGTTCGGCTCGCAACTGACCCAAGGCATCCACACTCAAGGCCTGGACGGCCAGTACGACGTGCGACAGGGCCTCGAT
GCACTGCTGCGCGGCAGCGGCCTGCAGGTGCGGCAGGAAACCGACAACGCCTTCAGCCTGCAGCCCATCGATACCCCCGC
TGCGGGTGCGCCGGTCGAGCTCGGTGCGTCCACCGTGGTCGGCGACTGGCTGGCCGAGGCCCAGCAGGACAATGTGTTCG
AGCACCCCGGTGCCCGCGACGTAGTGCGTCGCGAGGAATTCGAGCGCAACGGCGCCACCACCGCTCGCGAAGTGCTCAAC
CGTATCCCCGGTGTCAACGCCCCCGACAACAACGGCACCGGTAGCCACGACCTGGCGCTGAACTTCGGCATCCGTGGCCT
CAACCCACGCCTGGCATCGCGCTCCACCGTGCTGATGGACGGCATCCCGGTGCCCTTCGCCCCGTACGGCCAGCCGCAGC
TGTCGCTGGCACCACTGAGCATGGGCAACATGGACGCCGTGGATGTGGTGCGCGGTGGCGGCGCGGTGCGCTACGGCCCG
CAGAACGTTGGCGGCATCGTCAACTTCGTCACTCGGGCGATCCCTGAACAGGCCACGTTCAAGGCCGCCATGCAGAACCA
GATCAGCCCGTCTTCCAGCCACGATGGCTTCAAGAACAGCGCCAACCTGCTGGTCGGCGGCACCAATGCCAACGGCCTGG
GCGGCGCCCTGCTGTATTCTGGCACCCGTGGCGGTGACTGGCGCGAACACAGCGACACGCAAATCGACGACCTGATCCTC
AAGGGCAAGCTGCAACTGGACGAAGCCAACAGCCTGCACGCCATGGCCCAGTACTACGAGGGTGAAGCCGACATGCCCGG
CGGCCTGAGCACTGCCGATTTCGCTGCCGACCCGTACCAGTCGACGCGCCTGAAGGACAAGTTCTGGGGCCGCCGCACCC
TGTTCAACTTCGGCTACGACTACAAGCAGGACGACCGCCAGTTCAGCGTCAACAGCTTCTTCACCAAGACCCTGCGCAGC
GGTTACCTGGACCAGGGCAGCTTCGTCTCGCTGTCGCCACGCGAGTACTGGGTACGCGGCATCGAAACCCGCTTCTCGCA
GGGCCTGGCCCTTGGCGACAGCTGGCACGAGCTGGGCATCGGCTACCGTTACGTCAACGAAGCCGGCCACGAACTGCGCT
TCCGCGAGCCGGTCAATGGCAGCCTGCCGACCACCGCCAGCCGCAATGACCGCGACACCCGTGGCAGCACCGAAGCCCAC
GCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCCGGTGTGCGCTACGAGATGATCGACTCCGA
GCAAAGCAACAAGCTCAACGGCCAGCGCTACCAAGGCAGCTACAACACCGCGCTGCCGGCGCTGAACGTGATGTACCACC
TGACCGACAGCTGGAACTTGTACGCCAACACCGAGGGCTCGTTCGGCAGCGTGCAGTACAGCCAGATGCCCAACCGGGTC
AGTAGCGGCGAAGTGAAACCGGAAAAGGCGCGCACCTGGGAAGTGGGTACCCGTTATGACAATGGTGACCTGCAGGCCGA
GATTGGCGCGTTCCTGATCAACTTCGACAACCAGTACGAAAGCAACCAGACCAACGACTCGGTGATCGCCCGCGGCGAAA
CTCGCCACCAGGGCATCGAGACCAGCGTGCGCTACGCGCTCGACGGCCTGAGCCCCGCCCTGGCCGGTTTCGATGTGCAT
GCCAGCTATGCGTTCGTCGACGCCACTATCCGCGAGGACGGGCCGAACAAAGGCAACCAGGTGCCGTTCTCGTCACGCCA
CAAGGGCAACCTGGGCGTGGGCTACACCGATGGCCCTTGGCAGCTGAACCTGGACGGCAGCTTCCAGAGCAGCCAGTACG
CAGACAACGCCAACACCAGCACCGAAAGCGCCGACGGCAGCACCGGGCGCATTCCGGGCTACATGCTGGTCAGCACCCGC
GCCGGGTACGACTTTGGCCCGCAGCTGTCGAACCTGAAAGTGGCGGTTGGGGTGAAGAATCTGTTCAACCGCGAGTACTA
CACGCGCTCTTACGATGACAACAACAAAGGGAAGTACGTGGGTGAGCCGCGTACCTTGTATGTGCAGACGTCGGTGGAAT
TCTGA

Protein sequence :
MPLRHSPFVHALLFTTTLGLATPAAYAETRSYHIAAGSLEDALNQFGRESGALISFGSQLTQGIHTQGLDGQYDVRQGLD
ALLRGSGLQVRQETDNAFSLQPIDTPAAGAPVELGASTVVGDWLAEAQQDNVFEHPGARDVVRREEFERNGATTAREVLN
RIPGVNAPDNNGTGSHDLALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAPLSMGNMDAVDVVRGGGAVRYGP
QNVGGIVNFVTRAIPEQATFKAAMQNQISPSSSHDGFKNSANLLVGGTNANGLGGALLYSGTRGGDWREHSDTQIDDLIL
KGKLQLDEANSLHAMAQYYEGEADMPGGLSTADFAADPYQSTRLKDKFWGRRTLFNFGYDYKQDDRQFSVNSFFTKTLRS
GYLDQGSFVSLSPREYWVRGIETRFSQGLALGDSWHELGIGYRYVNEAGHELRFREPVNGSLPTTASRNDRDTRGSTEAH
AIYLDDRIDIGRWTITPGVRYEMIDSEQSNKLNGQRYQGSYNTALPALNVMYHLTDSWNLYANTEGSFGSVQYSQMPNRV
SSGEVKPEKARTWEVGTRYDNGDLQAEIGAFLINFDNQYESNQTNDSVIARGETRHQGIETSVRYALDGLSPALAGFDVH
ASYAFVDATIREDGPNKGNQVPFSSRHKGNLGVGYTDGPWQLNLDGSFQSSQYADNANTSTESADGSTGRIPGYMLVSTR
AGYDFGPQLSNLKVAVGVKNLFNREYYTRSYDDNNKGKYVGEPRTLYVQTSVEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_27410 YP_008097227.1 amino acid ABC transporter substrate-binding protein VFG1047 Protein 0.0 64