|
Name : L483_04390 (L483_04390) Accession : YP_008092705.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Virulence Product : amino acid ABC transporter substrate-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 954851 - 957280 bp Length : 2430 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : GTGAACAACAACAAGCCTTTATTACGCTTGCGCGCCCTGTCGCTGGCCTTGGCGGTCAGCGCCGTGACCGTCAACAGCCA GGCCGCAGAGGCGGGCAAAACCCTCCAGATCCAGGCCCAACCGCTGGGTTCGGCACTGAACCAGCTCGGCCAGCAAACCA ACCTGCAGCTGTTCTTCAGCCCCGAGCTGGTGGCGGGCAAACAGGCCCCGGCGGTGTCCGGCAACCTGGCGCCGGTGCAG GCGTTGCAACAGTTGCTGCAAGGCAGCGGGCTGACCTTCGAGATGCCCCAGGACACCGTGGTGGTAAAGCCGCTGCCGAC GGCCCTCGACCTGGGCAGCGGCAGCCTGGAGCTGGCGCCCACCGACATCAAGGTGGTCGGTGACTGGTTGGGCGATGCCC AGCAAAGCGTGGTGCAGAACCACCCCGGTGCCCGCACCGTGGTGCGCCGCGAGGCAATGGTTGAGCAGGGCGCGATGAGC GTGCGCGACGTACTGCGTGGCATCCCGGGTGTACAGGTGCAGGACTCCAACGGTACCGGCGGCAGCGACCTGTCGCTGAA CGTGGGCGTACGCGGCCTCACCTCGCGCCTGTCGCCACGCTCCACCGTATTGATCGACGGCATCCCGGCCGCCTTCGCGC CGTATGGCCAGCCACAGCTGTCGATGGCGCCGATTTCCTCAGGCAACCTGGACAGCATCGATGTGGTGCGTGGTGCCGGT TCGGTGCGCTATGGCCCGCAGAACGTGGGTGGGGTGATCAATTTCGTCACCCGGGCGATTCCGGAAAAGGCCTCGGCGGA ACTGTCCACCACCCTTGAAACCTCCCAGCACGGCGGCTGGAAGCACACCGAGTCGGCCTTCGTCGGCGGCACGGCGGACA ACGGCATGGGCGTGGCGCTGCTGTACACCGGGGTGAACGGCAACGGTTACCGTGAAAGCAATAATGGAAACGACATCGAC GACGTCATCCTCAAGACCCACTGGGCGCCCACCGATGTCGATGAGTTCTGGCTCAACTTCCATTATTACGATGGCCGTGC CGACATGCCCGGCGGCCTGACCCAGGCGCAGTACGACAGCAACCCTTATCAGTCGCTGCGCGACTACGACTACTTCGCCG GCAGGCGCAAGGATGTGTCGTTCAAGTGGCAACGCCAGCTCGACGATGCCACCCAGTTCGAAGTACTGACGTATTACACC GACAGCTTCCGCGGCAGCGCCATCGCCTCGCGTGACATGAAGACCCTGTCCTCTTACCCGCGCAACTACCACACCTTCGC CATCGAGCCACGGGTGTCGCGCATCTTCTTTGCCGGCCCCACCACTCAGGAAGTCAGCGTGGGCTATCGCTACCTGAAGG AAGCGATGCGCGAACAGTCGACCCGCCTGGCGCTGATCGACAACGTGCCGACCGTGACCCCGACCTCTGACGGCCATGTG TTCCAGGACCGCAGCGGCGGCACGGAGGCCAGCGCGTACTACATCGACGACAAGATCGATGTGGGCAACTGGACCATCAC GCCGGGCATCCGCTTCGAGCACATCAATACTGACTGGCGCGACCGCCCGGTGCTGGATGCCAACAACCGCCCGGTGGCGG AGAAGAAGCGCAGCATCACCAGTAACGAACCACTGCCGGCCCTGAGCGTGATGTACCACATCTCCGACGCGTGGAAAGTG TTCGCCAACTACGAAACCTCGTTCGGGAGTTTGCAGTACTTCCAGCTGGGCCAAGGCGGTACTGGCAACAGCACGGCCAA TGGCCTGGAGCCGGAAAAGGCCAAGACCTACGAAATCGGCACGCGTTATGACAATGGCGGTTTCGCGGGTGAACTGACCG CGTTCTACATCGACTTTGATGACGAACTGCAGTACATCAGCAACGACGTAGGCTGGACCAACCTCGGGGCGACCAAGCAC CAGGGTATCGAAGCTTCGGTGCGTTATGACCTGGCTGGGCTGGACCCGCGCCTGGAAGGGCTTTCGGTGAATGGTGGTTA CACCTTTACCCGGGCCACGTATGAAGGTGAAATCCCGGGCTTCAAGGGCCGTGACCTACCGTTCTATTCACGTCAGGTGG CCACCGCCGGCGTGCGTTACGCGGTTAACCGCTGGACCTGGAACCTGGACGCCTATGCCCAATCCAGGCAGCGCGCACCG GGGACCGGGATCAATGCCGATGGCAGCTTCAACGGCGACTACATCACCGAGCCGAGTGCGGATGGGCAGTATGGTGATAT CCCGGGTTACGTGACCTGGCATGCCCGTGGCGGGTATGAGTTCGGGCCAGAGATGTCCAACCTGAAGCTGGCGGCGGGGG TGAAGAACCTGTTCGACAAGCAGTATTTCACCCGCTCCAGCGACAACAACGCCGGCCTCTATGTAGGTGAGCCGCGGACC TTTTATGTGCAGGCCAGCGTAGGGTTCTGA Protein sequence : MNNNKPLLRLRALSLALAVSAVTVNSQAAEAGKTLQIQAQPLGSALNQLGQQTNLQLFFSPELVAGKQAPAVSGNLAPVQ ALQQLLQGSGLTFEMPQDTVVVKPLPTALDLGSGSLELAPTDIKVVGDWLGDAQQSVVQNHPGARTVVRREAMVEQGAMS VRDVLRGIPGVQVQDSNGTGGSDLSLNVGVRGLTSRLSPRSTVLIDGIPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAG SVRYGPQNVGGVINFVTRAIPEKASAELSTTLETSQHGGWKHTESAFVGGTADNGMGVALLYTGVNGNGYRESNNGNDID DVILKTHWAPTDVDEFWLNFHYYDGRADMPGGLTQAQYDSNPYQSLRDYDYFAGRRKDVSFKWQRQLDDATQFEVLTYYT DSFRGSAIASRDMKTLSSYPRNYHTFAIEPRVSRIFFAGPTTQEVSVGYRYLKEAMREQSTRLALIDNVPTVTPTSDGHV FQDRSGGTEASAYYIDDKIDVGNWTITPGIRFEHINTDWRDRPVLDANNRPVAEKKRSITSNEPLPALSVMYHISDAWKV FANYETSFGSLQYFQLGQGGTGNSTANGLEPEKAKTYEIGTRYDNGGFAGELTAFYIDFDDELQYISNDVGWTNLGATKH QGIEASVRYDLAGLDPRLEGLSVNGGYTFTRATYEGEIPGFKGRDLPFYSRQVATAGVRYAVNRWTWNLDAYAQSRQRAP GTGINADGSFNGDYITEPSADGQYGDIPGYVTWHARGGYEFGPEMSNLKLAAGVKNLFDKQYFTRSSDNNAGLYVGEPRT FYVQASVGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecA | AAL08456.2 | FecA | Not tested | SRL | Protein | 3e-134 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| L483_04390 | YP_008092705.1 | amino acid ABC transporter substrate-binding protein | VFG1047 | Protein | 2e-134 | 46 |
