Gene Information

Name : PCA10_23920 (PCA10_23920)
Accession : YP_008102729.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : putative ferric citrate receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2630207 - 2632666 bp
Length : 2460 bp
Strand : +
Note : -

DNA sequence :
GTGAACAACGATCAACAGCAACAACCGCAATCGCCTGCATCCACCCGCAAGACCGCCCGCGCACAGCGCTTGCTGCCCCT
GAGCCTGGCCATCGCCCTGGCCCTGGGCAGCGTCGGCGCCGTGGCGTCCGAGCGCATGGACATCCATATCCCGGCGCAGT
CCCTGGCCGGCGCCCTGGGTCAGCTGGGCCAGCAGACTTCGCTGCAGCTGTTCTTCAGCCCCGACCTGGTGGCGGGCAAG
CAAGCCCCGGCGGTGGACGGCAGCCTGCTGCCGGAAGAGGTCCTGGCGACCCTGCTGCACGGCAGCGGCCTGACCTTCGA
CCTGGCCGACGGCACCGCCATCCTGCGTCGGGTATCCGCTGACGAAGGCGCTTCGGCCATGGAGCTGCCGGCGTCCAGCA
TCAACGTGGTGGGTGACTGGCTGGGCACCGCCGAAGAAAGCGTGGTGCAGAACCACCCCGGCGCGCGCACCGTGGTACGC
CGCGAGGCCATGATCGAGAAGGGCGCAATGAACGTGCGCGACGCGCTGCGTTCGGTGCCCGGCGTCCAGGTACAGGACTC
CAACGGCACCGGCGGCAGCGACATCGCCCTGAACTTCGGCGTGCGTGGCCTTACCTCGCGCCTGTCGCCGCGCTCCACCG
TGCTGATCGACGGCGTGCCGGCGGCATTCGCGCCCTATGGCCAGCCGCAGCTGTCCATGGCGCCCATCTCCGTCGGCAAC
CTCGACAGCATCGACGTGGTGCGTGGCGCCGGTTCCGTGCGCTATGGCCCGCAGAACGTCGGCGGGGTCATCAACTTCGT
CACCCGCGCGATTCCGGAAACCTACTCGGGCGATGTGTCCAGCACCATCGAAGACACCGGCCATGGCGGTCCGAAGTTCC
TCAACAGCGCCTTCATCGGCGGCACCGCCGACAACGGCATGGGTGCCGCGCTGCTCTATTCGAGCGTGAATGGCGACGGT
TTCCGCGACAGCAACAACCGCAACGATATCGACGACGTCATGCTCAAGACCCACTGGGCGCCCACCGAGCAGGACGACCT
GGCGCTGAACTTCCATTACTACGACGCCACCGCCGACATGCCCGGCGGCCTGACCCAGGCCCAGTACGACGACGATCCCT
TCCAGTCGGACCGCGACCACGACGACTTCAGCGGCCGCCGCAAGGATGTCTCGCTGAAATACCTGCGCCTGATCGACGAC
GTCACCCAGTTCGAAGTGCTGACCTACTACACCGACAGTTTTCGTGGCAGCAACATCGCCACCCGCGACCAGCGCTTCCT
CAGTTCCTTCCCGCGCAACTACTACACCTACGGTATCGAGCCGCGGCTTTCGCGCATCTTCTTCGCCGGTGACAGCACCC
ACGAAGTCGGGGTCGGCTACCGCTACCTGAAGGAATCCATGCGCGAGCAGACCAGCCGCGTGACCCTGGTGGACAACGTC
CCGACGCCCACCCCCGGCCCGTCGGCCGATGGCCACGTGTACCAGGACCGCACCGGCAACACCGAGGCCAACTCCTTCTA
CATCGACGACAAGATCGACGTCGGCAACTGGACCATCACCCCCGGCGTGCGCTTCGAGAGCATCAACACCGACTGGCGCG
ATCGCCCGGTGCTCGGCACCAACGGCCAGCCCACGCAGGAGAAGAACCGCAGCAAGGACTACAACGAGCCGCTGCCGGCC
ATCAGCGTGATGTACCACGTCTCCGACGCCTGGAAGCTGTTCGCCAACTACGAGACATCCTTCGGCAGCCTGCAGTACTT
CCAGATCGGCCAGGGTGGTACCGGCGACAACTCGGCCAACGGCCTGGAACCGGAAAAGGCCAAGACCTACGAGATCGGCA
CCCGCTACAACGATGGCAAGTGGGGCGGCGAAGCCACGCTGTTCTACATCGACTTCGACCATGAGCTGCAGTACATCAGC
AACTCCGTGGGCTGGACCAACCTGGGCGCCACCAAGCACCAGGGCCTGGAGCTTTCCGGCCGCTACGACCTGGACGAGGT
GCTCGCCGGCCTGAGCCTGACCGGCACCTACACCTTCACCCGCGCCACCTACGAGGGCGACATCCCGGGGTTCCGCACCC
GCGACCTGCCGTTCTACTCGCGCAACGTGGCCAACATCGGCCTGCGCTACCAGGTGGATCGCTGGACCTACAACTTCGAC
GGCTACGCCCAGTCCGGCCAGCGCGCGCCGGGCACCGGCATCGACGGCAACGGCAACTTCACCGGCGACTACATCACCGA
ACCGACCGCCGACGGCCAGTTCGGCGACATTCCCGGCTACGTGACCTGGAACGCCCGTGGCGCCTACGACTTCGGCGAGC
AGCTGTCCAACCTGAAGCTGGGCGTGGGCATGAAGAACATCTTCGACAAGCGCTTCTTCACCCGCTCCAGCGACAACAAC
GCCGGCATCTACGTGGGCCAGCCGCGCACGGTGTACGTGCAGGCCAGCGTGGGGTTCTGA

Protein sequence :
MNNDQQQQPQSPASTRKTARAQRLLPLSLAIALALGSVGAVASERMDIHIPAQSLAGALGQLGQQTSLQLFFSPDLVAGK
QAPAVDGSLLPEEVLATLLHGSGLTFDLADGTAILRRVSADEGASAMELPASSINVVGDWLGTAEESVVQNHPGARTVVR
REAMIEKGAMNVRDALRSVPGVQVQDSNGTGGSDIALNFGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISVGN
LDSIDVVRGAGSVRYGPQNVGGVINFVTRAIPETYSGDVSSTIEDTGHGGPKFLNSAFIGGTADNGMGAALLYSSVNGDG
FRDSNNRNDIDDVMLKTHWAPTEQDDLALNFHYYDATADMPGGLTQAQYDDDPFQSDRDHDDFSGRRKDVSLKYLRLIDD
VTQFEVLTYYTDSFRGSNIATRDQRFLSSFPRNYYTYGIEPRLSRIFFAGDSTHEVGVGYRYLKESMREQTSRVTLVDNV
PTPTPGPSADGHVYQDRTGNTEANSFYIDDKIDVGNWTITPGVRFESINTDWRDRPVLGTNGQPTQEKNRSKDYNEPLPA
ISVMYHVSDAWKLFANYETSFGSLQYFQIGQGGTGDNSANGLEPEKAKTYEIGTRYNDGKWGGEATLFYIDFDHELQYIS
NSVGWTNLGATKHQGLELSGRYDLDEVLAGLSLTGTYTFTRATYEGDIPGFRTRDLPFYSRNVANIGLRYQVDRWTYNFD
GYAQSGQRAPGTGIDGNGNFTGDYITEPTADGQFGDIPGYVTWNARGAYDFGEQLSNLKLGVGMKNIFDKRFFTRSSDNN
AGIYVGQPRTVYVQASVGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 9e-134 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCA10_23920 YP_008102729.1 putative ferric citrate receptor VFG1047 Protein 5e-134 44