Gene Information

Name : PCA10_33230 (PCA10_33230)
Accession : YP_008103660.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : putative RNA polymerase ECF-type sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3669368 - 3669886 bp
Length : 519 bp
Strand : +
Note : -

DNA sequence :

GTGTCGGCCGGTGATTCCGCGAACCCGCATCTGGTAGGGCTGCTCTATCGAGACCATCGTGACTGGCTGTTCGGCTGGCT
ACGCAAGACGGTGCACTGCCCCCACCGCGCGGAAGACGTCAGCCAGGACACCTTCCTGCGCCTGCTCGCCCGCGACGACC
TGCAACCTCCCCGCGAGCCCCGCGCCCTGTTGGCCACCATCGCCCGTGGCCTGCTGGTGGATCAGTTCCGCCGCAACGAC
CTGGAGCGCGCCTACCTGGACGAACTGGCGCAGGCACCCCACGACCTCCACCCCAACCCCGAGGAACAGGCCCTGATCCT
GGAAAGCCTGCGGGAAATCGACCGCCTGCTGGGGCAACTGTCCAGCAAGGCGCGCAGCGCGTTTCTCTACAACCGCCTGG
ACGGCCTCGGCCACGCCGAGATCGCCGAGCGCCTGGGGGTTTCCACCTCGCGGGTGCGCCAGTACCTGGCCCAGGGCATG
CGCCAGTGCTACATCGCCCTCTACGGGGAGCCGACATGA

Protein sequence :

MSAGDSANPHLVGLLYRDHRDWLFGWLRKTVHCPHRAEDVSQDTFLRLLARDDLQPPREPRALLATIARGLLVDQFRRND
LERAYLDELAQAPHDLHPNPEEQALILESLREIDRLLGQLSSKARSAFLYNRLDGLGHAEIAERLGVSTSRVRQYLAQGM
RQCYIALYGEPT

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	2e-32	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PCA10_33230	YP_008103660.1	putative RNA polymerase ECF-type sigma factor	VFG1049	Protein	7e-33	46