Gene Information

Name : PCA10_40910 (PCA10_40910)
Accession : YP_008104428.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : putative RNA polymerase ECF-type sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4500905 - 4501429 bp
Length : 525 bp
Strand : +
Note : -

DNA sequence :

ATGTCGACCCCTTCCTACCAGCGGCAAGTCCAGCTGTATTACCTCGATAACCACGGATGGATCCGCGCCTGGCTCCAGCG
TAAGCTCGGCAATGCCCAGGATGCGGCGGACCTGGCCCATGACGTGTTCGTGCGCCTGCTCGCCAAACCCCGCACCTTCG
ACAGCGACAGCCATGCCCGCGCCTACCTGAGCGGCATGTCACGCAATGTCTGCGTGGACTTCTGGCGGCGGCGCCAGGTG
GAACAGGCCTGGCTCGATGTGTTGGCCAGCCGCCCGGAAGACTTCGCGCCCTCGGAAGAACACCGCGCCATGGTCCTCGA
AGCCCTGCAGCAGGTTCACACCATGCTTTGCCGCCTGCCGGAGAAAGTGGCCGAAGCCTTCCTGCTGGCGCAGCTCCATG
GCCTGGGCAACAAGGCCATCGCCGAGCGCCTGGGGGTGTCCGAACGCAGCGTGACGCGTTACCTGAGCGATGCGATGTAC
CAGTGCCTGCTGCTGGAAGCCGAACTCGACGAGGCGCTGGTCTGA

Protein sequence :

MSTPSYQRQVQLYYLDNHGWIRAWLQRKLGNAQDAADLAHDVFVRLLAKPRTFDSDSHARAYLSGMSRNVCVDFWRRRQV
EQAWLDVLASRPEDFAPSEEHRAMVLEALQQVHTMLCRLPEKVAEAFLLAQLHGLGNKAIAERLGVSERSVTRYLSDAMY
QCLLLEAELDEALV

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-26	44

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PCA10_40910	YP_008104428.1	putative RNA polymerase ECF-type sigma factor	VFG1049	Protein	1e-26	44