Gene Information

Name : PCA10_47060 (PCA10_47060)
Accession : YP_008105043.1
Strain : Pseudomonas resinovorans NBRC 106553
Genome accession: NC_021499
Putative virulence/resistance : Virulence
Product : putative RNA polymerase ECF-type sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5195005 - 5195526 bp
Length : 522 bp
Strand : +
Note : -

DNA sequence :

TTGAATCACGGCGCCGACGCCCTGCCGCCCCCGCCGGCCGACTCCCTGCACCGCCTCTACAGCGACCACCACGGTTGGCT
GACGGGCTGGCTGCGGCGGCGCCTCGGATGCCCGCAGAATGCCGCCGACCTCGCCCAGGACACCTTCCTGCGCGTGCTGC
TGGCACGGGAGAAGCCGGTCATCCTCGAGCCGCGCGCCTTCCTCACCACGGTGGCCAAGCGCGTGCTGGCCAACCACTAC
CGCCGCCAGGACATCGAACGCGCCTACCTCGAAGCCCTCGCCGCGCAGCCGGAAATCCTGGCCCCGAGCGAGGAAGAGCG
CGCCATCGTCCTGGAAACCCTGGTGGAGCTCGACCGTCTGCTCGATGGCCTGCCCGCCGTGGCCAAGCGCGTATTCCTGC
TGGCCCAGGTGGATGGCATGACCTACGCCGAAATCGCCGAGCAACTCGATATCTCCCTGTCCACCGTCAAGCGCCACATG
GTCAAGGCCGCGCAGCGCTGCTACTTCGCGGAGAGCTGCTGA

Protein sequence :

MNHGADALPPPPADSLHRLYSDHHGWLTGWLRRRLGCPQNAADLAQDTFLRVLLAREKPVILEPRAFLTTVAKRVLANHY
RRQDIERAYLEALAAQPEILAPSEEERAIVLETLVELDRLLDGLPAVAKRVFLLAQVDGMTYAEIAEQLDISLSTVKRHM
VKAAQRCYFAESC

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	2e-36	51

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PCA10_47060	YP_008105043.1	putative RNA polymerase ECF-type sigma factor	VFG1049	Protein	1e-36	51