Name : ccmF (PP4_14440) Accession : YP_008112481.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1675648 - 1677636 bp Length : 1989 bp Strand : + Note : - DNA sequence : ATGAATGCGGCACTGGTAATCCCTGAGCTCGGCCAGTTGGCGATGATTCTGGCCATCTGCTTTGCCGCCGTGCAGGCCAG TGTGCCGCTGCTCGGCGCCTGGCGTGGCGACAGCCTGTGGATGAGCCTGGCGCGCCCGGCGGCGTGGGGGCAATTCGCCT TCCTGGCTTTTGCCTTCGCCTGTTTGACCCATGCCTTCATGACCGACAACTTCTCCGTCGCCTATGTGGCCAGCAACTCC AACAGCGCCTTGCCGTGGTACTACAAGTTCAGCGCCGTATGGGGCGCCCACGAAGGTTCGTTGCTGCTGTGGGCGTTTAT CCTGGGCGGCTGGACCTTTGCCGTGTCGGTGTTCTCGCGTCAGTTGCCGCAGGTGATGCTGGCCCGCGTGCTGGCGGTGA TGGGCATGATCAGCGTCGGCTTCCTGAGCTTCCTGATCATCACCTCCAACCCGTTCCAGCGCCTGCTGCCGCAAGTGCCC ACCGACGGCCGCGACCTCAACCCGCTGCTGCAGGACTTCGGCCTGATCGTTCACCCGCCGATGCTGTACATGGGCTACGT GGGCTTTTCGGTGGCCTTTGCCTTCGCCATTGCCGCCTTGCTCGGCGGCCGCCTGGACGCTGCCTGGGCGCGCTGGTCGC GGCCGTGGACCATCGTCGCCTGGGCCTTCCTGGGGGTTGGCATCACCCTGGGCTCGTGGTGGGCCTATTATGAGCTGGGC TGGGGTGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCCTGGCTGGTGGGCACGGCGCTGATCCACTC GCTGGCGGTGACCGAAAAGCGTGGGGTGTTCAAGAGCTGGACCGTGTTGTTGGCAATTGCCGCATTCTCGCTGAGCCTGC TGGGTACCTTCCTGGTGCGCTCCGGCGTGCTGACCTCGGTGCACGCGTTTGCCGCAGACCCGTCGCGGGGCATTTTCATC CTGTTCTTCCTGTTGTTCGTGGTCGGTGGTTCGCTCACCCTGTTCGCCCTGCGCGCACCGGTGGTCAAGAGCCAGGTCGG CTTCGCCCTGTGGTCCCGCGAGACGCTGCTGCTGGCCAACAACCTGGTGCTGGTGGTGGCCGCGTCGATGATTCTGCTCG GCACGCTGTACCCGCTGGTGCTTGATGCCCTGACCGGGGCCAAGCTGTCGGTGGGTCCGCCGTATTTCGATGCCTTGTTC CTGCCGCTGATGGCACTTCTGATGGTGGTAATGAGCGTGGGCGTGCTGGTGCGCTGGAAGGACACCCCAGGCAAATGGCT GGTCAGCATGATCACCCCGGTGCTGATCGGCAGTGCCATCCTTGCCCCGGTTGCCGGTTTTATCGTTGACGACTTCGACT GGCCGACGCTGACCGCCTTCGCCCTGGCGGCCTGGGTGGTACTCGGCGGGCTGCGCGACATCCTCGACAAGACCCGTCAC AAAGGCCTGCTCAAGGGCCTGCCTGGCCTGGGGCGCAGCTACTGGGGCATGCAGCTGGCACACCTTGGCCTGGCGGTGTG TGCGTTGGGCGTGGTGCTGTCGAGCAACAACAGCGCCGAACGCGACCTGCGCATGGCCCCGGGCGAAAGCGTGGAGCTGG GTGGGTATCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGCCGAACTTCATTTCCGACAAAGGTACCGTCGTTGTC AGCCGTGATGGCCGTGAAGTGACTACCCTGCACCCGGAAAAGCGCCTGTACACCGTGCAGCAGTCGATGATGACCGAAGC TGGCATCGATGCCGGCTTTACCCGCGACCTGTACGTTGCCCTGGGCGAGCCGCTGGAAAACGGCGCCTGGGCGGTGCGTG TGCACATCAAGCCTTATGTCCGCTGGATCTGGCTGGGCGGTCTGCTGACCGGCCTGGGCGGGTTGCTGGCGGCACTCGAC CGGCGCTACCGCGTCAAGGTCAAGACCCGGGTGCGTGATGCCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MNAALVIPELGQLAMILAICFAAVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWAFILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFI LFFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF LPLMALLMVVMSVGVLVRWKDTPGKWLVSMITPVLIGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDILDKTRH KGLLKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGAKHFEGPNFISDKGTVVV SRDGREVTTLHPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALD RRYRVKVKTRVRDALGVSGAAA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-108 | 57 |
ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-103 | 56 |