Gene Information

Name : ccmF (PP4_14440)
Accession : YP_008112481.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1675648 - 1677636 bp
Length : 1989 bp
Strand : +
Note : -

DNA sequence :
ATGAATGCGGCACTGGTAATCCCTGAGCTCGGCCAGTTGGCGATGATTCTGGCCATCTGCTTTGCCGCCGTGCAGGCCAG
TGTGCCGCTGCTCGGCGCCTGGCGTGGCGACAGCCTGTGGATGAGCCTGGCGCGCCCGGCGGCGTGGGGGCAATTCGCCT
TCCTGGCTTTTGCCTTCGCCTGTTTGACCCATGCCTTCATGACCGACAACTTCTCCGTCGCCTATGTGGCCAGCAACTCC
AACAGCGCCTTGCCGTGGTACTACAAGTTCAGCGCCGTATGGGGCGCCCACGAAGGTTCGTTGCTGCTGTGGGCGTTTAT
CCTGGGCGGCTGGACCTTTGCCGTGTCGGTGTTCTCGCGTCAGTTGCCGCAGGTGATGCTGGCCCGCGTGCTGGCGGTGA
TGGGCATGATCAGCGTCGGCTTCCTGAGCTTCCTGATCATCACCTCCAACCCGTTCCAGCGCCTGCTGCCGCAAGTGCCC
ACCGACGGCCGCGACCTCAACCCGCTGCTGCAGGACTTCGGCCTGATCGTTCACCCGCCGATGCTGTACATGGGCTACGT
GGGCTTTTCGGTGGCCTTTGCCTTCGCCATTGCCGCCTTGCTCGGCGGCCGCCTGGACGCTGCCTGGGCGCGCTGGTCGC
GGCCGTGGACCATCGTCGCCTGGGCCTTCCTGGGGGTTGGCATCACCCTGGGCTCGTGGTGGGCCTATTATGAGCTGGGC
TGGGGTGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCCTGGCTGGTGGGCACGGCGCTGATCCACTC
GCTGGCGGTGACCGAAAAGCGTGGGGTGTTCAAGAGCTGGACCGTGTTGTTGGCAATTGCCGCATTCTCGCTGAGCCTGC
TGGGTACCTTCCTGGTGCGCTCCGGCGTGCTGACCTCGGTGCACGCGTTTGCCGCAGACCCGTCGCGGGGCATTTTCATC
CTGTTCTTCCTGTTGTTCGTGGTCGGTGGTTCGCTCACCCTGTTCGCCCTGCGCGCACCGGTGGTCAAGAGCCAGGTCGG
CTTCGCCCTGTGGTCCCGCGAGACGCTGCTGCTGGCCAACAACCTGGTGCTGGTGGTGGCCGCGTCGATGATTCTGCTCG
GCACGCTGTACCCGCTGGTGCTTGATGCCCTGACCGGGGCCAAGCTGTCGGTGGGTCCGCCGTATTTCGATGCCTTGTTC
CTGCCGCTGATGGCACTTCTGATGGTGGTAATGAGCGTGGGCGTGCTGGTGCGCTGGAAGGACACCCCAGGCAAATGGCT
GGTCAGCATGATCACCCCGGTGCTGATCGGCAGTGCCATCCTTGCCCCGGTTGCCGGTTTTATCGTTGACGACTTCGACT
GGCCGACGCTGACCGCCTTCGCCCTGGCGGCCTGGGTGGTACTCGGCGGGCTGCGCGACATCCTCGACAAGACCCGTCAC
AAAGGCCTGCTCAAGGGCCTGCCTGGCCTGGGGCGCAGCTACTGGGGCATGCAGCTGGCACACCTTGGCCTGGCGGTGTG
TGCGTTGGGCGTGGTGCTGTCGAGCAACAACAGCGCCGAACGCGACCTGCGCATGGCCCCGGGCGAAAGCGTGGAGCTGG
GTGGGTATCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGCCGAACTTCATTTCCGACAAAGGTACCGTCGTTGTC
AGCCGTGATGGCCGTGAAGTGACTACCCTGCACCCGGAAAAGCGCCTGTACACCGTGCAGCAGTCGATGATGACCGAAGC
TGGCATCGATGCCGGCTTTACCCGCGACCTGTACGTTGCCCTGGGCGAGCCGCTGGAAAACGGCGCCTGGGCGGTGCGTG
TGCACATCAAGCCTTATGTCCGCTGGATCTGGCTGGGCGGTCTGCTGACCGGCCTGGGCGGGTTGCTGGCGGCACTCGAC
CGGCGCTACCGCGTCAAGGTCAAGACCCGGGTGCGTGATGCCCTGGGCGTGTCTGGAGCAGCTGCATGA

Protein sequence :
MNAALVIPELGQLAMILAICFAAVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS
NSALPWYYKFSAVWGAHEGSLLLWAFILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP
TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELG
WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFI
LFFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF
LPLMALLMVVMSVGVLVRWKDTPGKWLVSMITPVLIGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDILDKTRH
KGLLKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGAKHFEGPNFISDKGTVVV
SRDGREVTTLHPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALD
RRYRVKVKTRVRDALGVSGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 1e-108 57
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 3e-103 56