Gene Information

Name : fecI (PP4_28360)
Accession : YP_008113873.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3223576 - 3224106 bp
Length : 531 bp
Strand : +
Note : -

DNA sequence :

ATGCCTGACTCCCTCCCCTCGACCGGACACAGCCTGGCCGGCCTGTACGCCAACCACCATGGCTGGCTGGTGAACTGGCT
GCGCGGCCGGCTGCAGTGTTCGCAGCAGGCCGCCGACCTGGCCCAGGACACGTTCGTGCGTGTACTGCTGGCCGACCGCA
GCCAGCCTTTGCTCAGTGAACTGCGCGAGCCGCGCCACTTTCTGGTGACCATGGCCAGGCGCGTGATGATCGACAGCTTC
CGCCGCCGGGCACTGGAGCAGGCCTACCTGCAACTGTTGGCCGAACAGCCCGAACAGTATGCGATTTCCCCCGAGGAACG
CTGGATGCTGGTCGAAACCCTGCAAGCACTGGATGCGATGCTTGAAGGCCTGGGCAAGAAGGTAAAGCAGGCGTTTCTGT
TATCGCAGTTGCGTGGCCTGGGCTACAAGGACATCGCCGCCCAGATGGACGTATCGGTCAGTTCGGTCACCAAGTACATT
GCCCGCGCCACCGAGCACTGCTTGCTGTTTGCCCTGGAACACGGCCAGTGA

Protein sequence :

MPDSLPSTGHSLAGLYANHHGWLVNWLRGRLQCSQQAADLAQDTFVRVLLADRSQPLLSELREPRHFLVTMARRVMIDSF
RRRALEQAYLQLLAEQPEQYAISPEERWMLVETLQALDAMLEGLGKKVKQAFLLSQLRGLGYKDIAAQMDVSVSSVTKYI
ARATEHCLLFALEHGQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-35	55

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI	YP_008113873.1	putative RNA polymerase sigma factor FecI	VFG1049	Protein	5e-36	55