Gene Information

Name : fecI (PP4_33090)
Accession : YP_008114346.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3762861 - 3763409 bp
Length : 549 bp
Strand : -
Note : -

DNA sequence :

ATGAGAGTCATTATTAAAGACGCTCTGATCGGTTCTACCATGTCCTATGCTGACCCTTCCCTGCAAAAAGCCGTGCACAC
GCTCTACGAGGACCATCATTCCTGGCTGTGCGGCTGGCTGCGCAGCAAGCTCGGGTGCATGGAGCATGCGGCCGACCTGG
CCCAGGACACGTTCATACGGGTGCTGACCCTGCGCAAGGCCGCGGAGCTGCAACAGCCACGGGCTTATCTGAGCAGCGTG
GCCCGCAGCCTGATGATCGACATGTTCCGGCGCCGTGCCGTGGAGCAGGCCTACCTGGAAACCCTCGCGGCACGGCCCGA
GCAGGTAGAGGTTTCGCCCGAGGCGCGCCTGCTGATCATCGAGACCCTGCTGGAAATTGATCGGCTCCTCGACGGCTTGG
GCACGCGTACCCGCGAGATCTTCCTCATGGCCCAGCTCGATGGCCTGAGCTATGTGGAAATCGCGCGGCGCCTGGATGTT
TCGCTCACTACCGTCAAAAAGCATGCAGTGCGGGCGCTGACCCATTGCCTGATGCTGGCCGAGGCGTGA

Protein sequence :

MRVIIKDALIGSTMSYADPSLQKAVHTLYEDHHSWLCGWLRSKLGCMEHAADLAQDTFIRVLTLRKAAELQQPRAYLSSV
ARSLMIDMFRRRAVEQAYLETLAARPEQVEVSPEARLLIIETLLEIDRLLDGLGTRTREIFLMAQLDGLSYVEIARRLDV
SLTTVKKHAVRALTHCLMLAEA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-35	48

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI	YP_008114346.1	RNA polymerase sigma factor FecI	VFG1049	Protein	1e-35	48