Gene Information

Name : fecI (PP4_37730)
Accession : YP_008114810.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4294427 - 4294927 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence :
ATGTCGACGCTCGATCCCCAGGCCCTGCACCAGCTGTACAGCGAAAACAACAGCTGGCTGAAGGGCTGGCTGCGCGCCCG
CCTGGGCAACGCCGCCGATGCCTCCGACCTGGCCCACGACACGTTCTTGCGGGTAATGACCGCGCGCAACCCGTTGCCGA
TCCGCGAGCCGCGCAGCTACCTCAGCGCTATCGCCCGCGCGCTGCTGATCGACAAAGCCCGCCGCCGCGCCATCGAAAAA
GCCTACCTGCAAGCCCTGGCCTTGCGCCCGGAGCCGGTAGAGGTATCGCCGGAAGTGCGCTTGTCGATCATCGAAATGCT
GGTGGCCGTGGACACCCTGCTCGATGAACTCGGCGCCAAAACCCGCGCCATCTTCCTCGCCGTTCAACTGGAAGGCTTGA
CCTACGGTGCTGCGGCCGAGCGCTTCGGCGTGTCGGTTACCACCGTGAAGAACCACCTGATCAAGGCGATGACCCGCTGC
CTGCTGGCAGTCGAAGGCTGA

Protein sequence :
MSTLDPQALHQLYSENNSWLKGWLRARLGNAADASDLAHDTFLRVMTARNPLPIREPRSYLSAIARALLIDKARRRAIEK
AYLQALALRPEPVEVSPEVRLSIIEMLVAVDTLLDELGAKTRAIFLAVQLEGLTYGAAAERFGVSVTTVKNHLIKAMTRC
LLAVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-35 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_008114810.1 RNA polymerase sigma factor FecI VFG1049 Protein 2e-35 48