Gene Information

Name : PP4_44060 (PP4_44060)
Accession : YP_008115443.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : putative ferric citrate receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4988797 - 4991226 bp
Length : 2430 bp
Strand : -
Note : -

DNA sequence :
GTGAACAACAACAAACCCTTCCCACGCTTCCGCGCCCTGGCGCTGGCCCTGGCGGTCAGCGCCGTGACCGTCAACAGCCA
GGCTGCTGAGGCGGGCAACACCATCCAGATCCAGGCCCAACCGCTGGCTTCGGCGCTGAATCAGCTGGGTCAGCAAACCA
ACCTGCAGCTGTTCTTCAGCCCCGAGCTGGTGGCCGGCAAACAGGCCCCGGCGGTGTCCGGCAACCTGGCGCCGGTGCAG
GCGCTGCAGCAGTTGCTGCAAGGCAGCGGGCTGACCTTCGAGATGTCCCAGGACACCGTCGTGGTAAAGCCGCTGCCGAC
TACCCTCGACCTGGGCAGCGGCAGCCTGGAGCTGGCGCCCACCGACATCAAGGTGGTCGGTGACTGGTTGGGCGATGCCC
AGCAGAGCGTGGTGCAGAACCACCCCGGGGCGCGCACCGTGGTGCGTCGCGAGGCGATGGTGGAGAAGGGCGCGATGAAC
GTGCGCGACGTACTGCGCGGCATCCCGGGAGTGCAGGTGCAGGACTCCAACGGCACCGGCGGTAGCGACCTGTCGCTGAA
CGTGGGCGTGCGCGGCCTGACCTCGCGCCTGTCGCCGCGCTCCACCGTATTGATCGACGGCATCCCGGCCGCCTTCGCGC
CCTATGGCCAGCCACAGCTGTCGATGGCGCCGATCTCCTCGGGCAACCTCGACAGCATCGACGTGGTGCGTGGGGCCGGC
TCGGTACGCTATGGCCCGCAGAACGTGGGAGGGGTGATCAACTTCGTCACCCGGGCGATTCCGGAAAAGGCTTCGGCGGA
ACTGTCCACCACCCTGGAAACCTCCCGGCAGGGCGGCTGGAAGCACACCGAGTCGGCCTTCGTCGGCGGCACGGCTGACA
ACGGCATGGGCGTGGCGCTGCTGTACACCGGGGTGAACGGCAACGGTTACCGTGAAAGCAACAATGGCAACGACATCGAC
GACGTCATCCTCAAGACCCACTGGGCGCCCACCGATGTCGATGAGTTCTGGCTCAACTTCCATTACTACGATGGCCGTGC
CGACATGCCCGGCGGCCTGACCCAGGCCCAGTACGACAGCAACCCGTACCAGTCGCTGCGCGACTATGACTACTTCGCCG
GTCGGCGCAAGGATGTGTCGTTCAAGTGGCAGCGCCAGCTTGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACC
GACAGCTTCCGCGGCAGCGCCATCGCCTCGCGTGACATGAAGACCCTGTCATCGTACCCGCGCAACTATCACACCTTCGC
CATCGAGCCACGGGTGTCGCGCATCTTCTTTGCCGGCCCGACTACCCAGGAAGTCAGCGTGGGTTATCGCTACCTGAAGG
AAGCGATGCGCGAACAGTCGACCCGCCTGGCGCTGATCGACAACGTGCCGACCGTGACGCCGACCTCTGACGGCCACGTG
TTCCAGGACCGCAGCGGCGGTACCGAGGCCAGCGCCTACTACATCGACGACAAGATCGATGTGGGCAACTGGACCATCAC
CCCGGGCGTGCGCTTCGAGCACATCAATACCGACTGGCGCGACCGCCCGGTGCTGGATGCCAACAACCGCCCGGTGGCGG
AAAAGAAGCGCAGCATCACCAGCAACGAGCCGCTGCCGGCGCTGAGCGTGATGTACCACATCTCCGACGCATGGAAAGTG
TTCGCCAACTACGAAACCTCGTTCGGCAGCCTGCAGTACTTCCAGCTGGGCCAGGGCGGTACCGGCAACAGCACGGCCAA
TGGCCTGGAGCCGGAAAAGGCCAAGACCTACGAAATAGGCACGCGCTATGACGATGGTGGCTTTGCCGGCGAGCTGACGG
CGTTCTACATCGACTTCGATGACGAGCTGCAGTACATCAGCAACGATGTGGGCTGGACCAACCTCGGGGCGACCAAGCAC
CAGGGTATCGAGGCGTCGGTGCGCTACGACCTGGCCGGGCTGGACCCGCGCCTGGAAGGGCTTTCGGTGAGCGGTGGGTA
CACCTTTACCCGCGCCACATATGAAGGTGAGATCCCGGGTTTCAAGGGCCGTGACTTGCCGTTCTATTCACGTCAGGTGG
CCACCGCCGGCGTGCGTTACGCGGTCAACCGCTGGACCTGGAACCTGGACGCCTACGCCCAATCCAAACAGCGCGCGCCG
GGGACCGGGATCAACGCCGATGGCACCTTCAACGGCGACTACATCACCGAGCCAAGTGCGGATGGGCAGTATGGCGATAT
TCCGGGTTATGTGACCTGGCATGCCCGTGGCGGGTATGAATTCGGGCCCGAGATGTCCAACCTGAAGCTGGCGGCGGGGG
TGAAGAACCTGTTCGACAAGCAGTACTTCACCCGCTCCAGCGACAACAACGCCGGCCTCTACGTGGGTGAGCCGCGGACC
TTTTATGTGCAGGCCAGCGTAGGGTTCTGA

Protein sequence :
MNNNKPFPRFRALALALAVSAVTVNSQAAEAGNTIQIQAQPLASALNQLGQQTNLQLFFSPELVAGKQAPAVSGNLAPVQ
ALQQLLQGSGLTFEMSQDTVVVKPLPTTLDLGSGSLELAPTDIKVVGDWLGDAQQSVVQNHPGARTVVRREAMVEKGAMN
VRDVLRGIPGVQVQDSNGTGGSDLSLNVGVRGLTSRLSPRSTVLIDGIPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAG
SVRYGPQNVGGVINFVTRAIPEKASAELSTTLETSRQGGWKHTESAFVGGTADNGMGVALLYTGVNGNGYRESNNGNDID
DVILKTHWAPTDVDEFWLNFHYYDGRADMPGGLTQAQYDSNPYQSLRDYDYFAGRRKDVSFKWQRQLDDATQFEVLTYYT
DSFRGSAIASRDMKTLSSYPRNYHTFAIEPRVSRIFFAGPTTQEVSVGYRYLKEAMREQSTRLALIDNVPTVTPTSDGHV
FQDRSGGTEASAYYIDDKIDVGNWTITPGVRFEHINTDWRDRPVLDANNRPVAEKKRSITSNEPLPALSVMYHISDAWKV
FANYETSFGSLQYFQLGQGGTGNSTANGLEPEKAKTYEIGTRYDDGGFAGELTAFYIDFDDELQYISNDVGWTNLGATKH
QGIEASVRYDLAGLDPRLEGLSVSGGYTFTRATYEGEIPGFKGRDLPFYSRQVATAGVRYAVNRWTWNLDAYAQSKQRAP
GTGINADGTFNGDYITEPSADGQYGDIPGYVTWHARGGYEFGPEMSNLKLAAGVKNLFDKQYFTRSSDNNAGLYVGEPRT
FYVQASVGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 1e-134 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP4_44060 YP_008115443.1 putative ferric citrate receptor VFG1047 Protein 6e-135 46