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Name : secD (PP4_44400) Accession : YP_008115477.1 Strain : Pseudomonas putida NBRC 14164 Genome accession: NC_021505 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 5025761 - 5027623 bp Length : 1863 bp Strand : - Note : - DNA sequence : ATGCTGAACAAATACCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAA CCTCTACCCGGATGATCCGGCGGTACAGATCAGCGGTGCCAGTTCGGCGCTGCAGGTGAACCAGGCCGACCTCGATCGTG TCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAAGGCGCGAGCCTGGGTGAGAAGGGCAGCGGGCTGATCCGCCTG ACCAACCAGGAAGACCAACTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTATGTCGTGGCCCTGAACCT GGCACAGACTACCCCGCAATGGCTGCGCAACCTGGGTGCGAGCCCGATGAAGCTGGGCCTGGACCTGTCCGGTGGTGTGC ACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACCGCCCGCATGAAGGTCTACGAAGGCGAGGTCAAGACCTTGCTG CGCAAAGAGCGCATCCGCTACCGCAGCCTGCCTCAGCAGGATGGTGGCATCATGCTGGGCTTCGCTGACGATGCAACCCG CGAACAGGCACGTGCCCTGATCCGCAAGAATTTCAATGATTTCGACCTGACCACCACCGAGCGCAACGACCTCGCCGTGC TGCGTCTGGCGCTGACTCAGGCAAAAGTTGCCGAGATCCGCGAATACTCGATCAAGCAGAACCTCACCACCGTGCGCAAC CGTGTCAACGAGCTGGGCGTGGCCGAGCCGCTGGTACAGCGCCAGGGCGCCAACCGTATCGTGGTCGAGCTGCCGGGCGT GCAGGACACTGCCGAAGCCAAGCGTATCCTCGGTAAAACCGCCAACCTGGAGTTCCGCTTTGGTGCCGAGCCGGGTGCGT CCAAGGCCACTACCGAAGTGTTCGAGTTCCGCGAAGGCGGCCGTTCTGCGCCGGTCGAGCGCGGCCTGATCATCACCGGT GACCAGGTTACCGACGCCCAGGCCAGCTTTGACGAGCACGGTCGCCCACAAGTGAACATCCGCCTGGATGGCCACGGTGG CGAGCTGATGAGCCGTGCTACCCGTAGCAACGTCGGCCGCAGCATGGCAGTGATCTTCATCGAGCAGAAGCCGGTCACGC GCTACGTGAAGCAGACCGTCGACGGCGTCGAGAAGGACGTTGCCGTACAAAGCTTCGTGGAAGAGAAGAAGATCATCAGC CTGGCGACCATCCAGTCGCCACTGGGCAGCCAGTTCCGCATCACCGGCCTGAACGGCCAGGGCGAATCGTCCGAACTGGC CCTGCTGCTGCGTGCCGGTGGTCTGGCCGCGCCGATGTACTTCGCTGAAGAACGTACCATTGGCCCAAGCCTGGGTGCCG ACAACATCACCAAGGGTATCGATGCGTCGCTGTGGGGCATGCTGTTCGTCTCGCTGTTCATCATCGCCATCTACCGTGGC TTCGGCGTGATCGCCACCATCGCCCTTGCGGGCAACATGGTGCTGCTGCTGGCGCTGATGTCGCTGCTGGGTGCCACCCT GACCCTGCCGGGTATTGCCGGTATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGGATCC GCGAAGAGCTGAAAGCCGGCATGTCGGTACAGCGCGCCATCCACGAAGGCTTCAACCGCGCCTACACCGCGATCATCGAC GCCAACCTGACCAGCCTGCTGGTCGGCGGTATCCTGTTCGCCATGGGGACCGGCCCGGTCAAAGGCTTTGCGGTTACCAT GTCCCTCGGGATTTTCACCTCGATGTTCACCGCCGTCATGGTGACCCGCGCAATGGTCAACCTGACCTGCGGCGGGCGTG ACATCAAGAAGCTGTGGGTTTGA Protein sequence : MLNKYPLWKYALIVLVLVVGFIYSAPNLYPDDPAVQISGASSALQVNQADLDRVSKALVDAKIAVKGASLGEKGSGLIRL TNQEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNLGASPMKLGLDLSGGVHFLLEVDMDKAMTARMKVYEGEVKTLL RKERIRYRSLPQQDGGIMLGFADDATREQARALIRKNFNDFDLTTTERNDLAVLRLALTQAKVAEIREYSIKQNLTTVRN RVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRFGAEPGASKATTEVFEFREGGRSAPVERGLIITG DQVTDAQASFDEHGRPQVNIRLDGHGGELMSRATRSNVGRSMAVIFIEQKPVTRYVKQTVDGVEKDVAVQSFVEEKKIIS LATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIYRG FGVIATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREELKAGMSVQRAIHEGFNRAYTAIID ANLTSLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRAMVNLTCGGRDIKKLWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 86 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
