Gene Information

Name : PP4_07650 (PP4_07650)
Accession : YP_008111802.1
Strain : Pseudomonas putida NBRC 14164
Genome accession: NC_021505
Putative virulence/resistance : Virulence
Product : putative RNA polymerase ECF-type sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 889273 - 889767 bp
Length : 495 bp
Strand : -
Note : -

DNA sequence :

GTGCCCAGCGCGCTTACATCCACGGTCGAAGGCCTCTACCACGCTCATCACAACTGGCTCACTGGCTGGTTGCGCCGCCG
CCTGGGCTGCCCGCAGAGTGCCGCCGACCTGGCCCAGGACACCTACCTGCGCCTGCTGCAGGCCCGCGAGGCGCCACAGT
TGGTCGAGCCGCGTGCGTTCCTTGCAACGGTAGCCAAGCGCGTGCTGTGCAACCACTTTCGCCGCCAGGAACTGGAGCGT
GCCTACCTGCAGGCACTGGCACAGGTGCCAGAAGAAGTAGCACCGTGCGAGGAGCAGAAGGCGATCATCCTGGAGACCCT
GCTGGAGCTGGACCGCCTGCTGGACGGTTTGCCGTCACTGGTCAAACGCGCCTTCCTGCTGGCCCAGGTCGATGGCCTTG
GCCAGGGTGAAATTGCGCGTGAACTGGGCATCTCGCTGGCCACGGTCAAGCGCTATCTGACCAAGGCGGCCATGCGCTGC
TACTTCGCCCAATGA

Protein sequence :

MPSALTSTVEGLYHAHHNWLTGWLRRRLGCPQSAADLAQDTYLRLLQAREAPQLVEPRAFLATVAKRVLCNHFRRQELER
AYLQALAQVPEEVAPCEEQKAIILETLLELDRLLDGLPSLVKRAFLLAQVDGLGQGEIARELGISLATVKRYLTKAAMRC
YFAQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	6e-29	49

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PP4_07650	YP_008111802.1	putative RNA polymerase ECF-type sigma factor	VFG1049	Protein	2e-29	49