Gene Information

Name : Lp16_2254 (Lp16_2254)
Accession : YP_008122066.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein,N-terminal domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2403166 - 2403867 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATACATCGAAGTGCAGCAGGCAACGCGCCAGTTTAAAAATGGTGAGCAGGTCACCGTTGCTAATCGTGATATTTC
ATTTGAAGTTGACCAGGGTGCGGTCGTTGTGATTTTAGGTCCGAGTGGTGCGGGTAAGTCCACGTTACTCAATATTTTAG
GTGGCATGGACAGCCCTACGAGCGGCCGTGTGCTGGTGGATGGTGTGGACATTGCGCAATTTAACTCACGGCAATTAACG
ACCTATCGTCGGCAAGCGGTCGGGTTCGTTTTTCAATTCTACAACCTGGTTCCGAACTTGACGGTGCGTGAAAACGTCGA
GTTGGCGTCGCAAATCACCAAGGACGCACGCGACGTTGATGAGACGTTGGCCTTGGTAGGACTGACGCACCGGGCAGATA
ACTTTCCAGCCCAGTTGTCCGGTGGTGAACAACAGCGGGTCGCAATTGCGCGGGCAGTTGCGAAGAATCCCAAATTATTA
CTCTGTGATGAACCCACTGGCGCGCTCGACTATCAGACGGGGAAGCAAGTCTTACAGGTGATTCAAGATGCGGCTAAGCA
GACGCAGACAACGGTCATCATTGTGACGCATAATAGTGCGATTGCGCAGCTGGGTGACCAAGTCATTCGTATCAATGATG
CTCAAGTGCAGTCGGTTGAGCATAATGCTCATCCAACGCCTTTGGCTGAGATTGAATGGTAG

Protein sequence : 
MAYIEVQQATRQFKNGEQVTVANRDISFEVDQGAVVVILGPSGAGKSTLLNILGGMDSPTSGRVLVDGVDIAQFNSRQLT
TYRRQAVGFVFQFYNLVPNLTVRENVELASQITKDARDVDETLALVGLTHRADNFPAQLSGGEQQRVAIARAVAKNPKLL
LCDEPTGALDYQTGKQVLQVIQDAAKQTQTTVIIVTHNSAIAQLGDQVIRINDAQVQSVEHNAHPTPLAEIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_2254 YP_008122066.1 ABC transporter, ATP-binding protein,N-terminal domain protein NC_012469.1.7685735. Protein 1e-69 62
Lp16_2254 YP_008122066.1 ABC transporter, ATP-binding protein,N-terminal domain protein CP001581.1.gene798.p Protein 3e-42 43
Lp16_2254 YP_008122066.1 ABC transporter, ATP-binding protein,N-terminal domain protein NC_012469.1.7686878. Protein 1e-36 42