Gene Information

Name : Lp16_2484 (Lp16_2484)
Accession : YP_008122285.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2656267 - 2656980 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGATTATCGCAAATAAGATTAGCAAGCAAATTCAACTTGCGGATCATGATGTTGAGATATTGCATGAAACAACGATTCA
CGCTAAAACTGGCGAGTTTTTAAGTGTTATTGGTCCTTCTGGCTCAGGAAAAACGACTTTATTGAACTGTCTATCAGGAT
TAGTAAAACCAACCTCTGGTGAGGTTTACATTGATGGACAGTGTATCCAAAGCTTATCTGCACAAAAATTGGCGCAATTA
CGGCGCACAACGATTAGTACGATTTTTCAATCGTATAATTTATTGCCAGCGTTAAATGTTTTAGACAACGTGATACTACC
CTTACGTTTGAACCATCAACGAATAAGCAAAGTTAACGTTGAGACGTTATTAGGTGATTTAAATTTTAAGGCTAGTTTAA
GTCAGTTTCCTAGCCAATTATCAGGTGGAGAACAGCAAAAGGTTGCGATTGCTAGAACCCTAGTTATGCATGCCAAAATT
ATCTTTGCAGATGAACCAACAGGTGCTCTAGACTCAATGTCCAGGGAGGTAATATTTCAACAATTACGAGAGTTGGCTAA
TAATGGTGTCTGCATCATCATGGTAACTCATGATATTGAACAGGCAGCCCGTACTGATCGTGCATTAATCCTAAGCGATG
GTCACATTGTTTCTGAGGTCGAACGCCCGTCAGTTGATCAACTCTTTACTCAAATGGATAGTATACGGGGGTAA

Protein sequence : 
MIIANKISKQIQLADHDVEILHETTIHAKTGEFLSVIGPSGSGKTTLLNCLSGLVKPTSGEVYIDGQCIQSLSAQKLAQL
RRTTISTIFQSYNLLPALNVLDNVILPLRLNHQRISKVNVETLLGDLNFKASLSQFPSQLSGGEQQKVAIARTLVMHAKI
IFADEPTGALDSMSREVIFQQLRELANNGVCIIMVTHDIEQAARTDRALILSDGHIVSEVERPSVDQLFTQMDSIRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_2484 YP_008122285.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-35 42
Lp16_2484 YP_008122285.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-36 42
Lp16_2484 YP_008122285.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-32 41