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Name : secD (K756_02175) Accession : YP_008123237.1 Strain : Haemophilus parasuis ZJ0906 Genome accession: NC_021521 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 398282 - 400126 bp Length : 1845 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGTTAAATCGTTTCCCTCTTTGGAAGAACCTAATGGTGATCCTTGTGGTCGCCATTGGCATTTTATACGCCCTTCCAAA TTTATATGGTGAAGACCCTTCGGTACAGGTTTCCGGTACTAGAGGGCAACAAGCTTCAGATGAAACGCTGACGCAAGTTC AATCAGCACTCGCTTCATTAAATATTACGCCTAAGGCGATGAACCTTGAAAATGGTTCGATTTTAGTGCGTTTAAATAAG GACGAGGAACAGCTTCCAGCTAAGGAAAAAATCGCTGAAGTCTTAGGCAATAATTATTCTGTCGCTTTAAACCTTGCGCC TGCAACGCCAGAATGGCTAACTTCAATCGGTGGTGAGCCGATGAAGCGTGGTTTGGATTTGCGTGGCGGTGTTCGCTTCT TAATGGAAGTGGATATGAATACGGCATTGGCGAAACAGCAAGATCAGCTACAAGATACCTTGCGTAACGATTTTCGTAAG GAAAAATGGCAATACAAAGCGGTTAAAAAAGCAGAAAATTTTGCAACAGATGTAGAATTTAATGATACCGATACTGCAGA TAAAGCAGTTCGTTATATTCGCCGTACTAATCCTAATTTAGAAGCAACTTATATTTCTCCAACCGTTGTGCGTTTTGCTC AATCTGCTCAGGGGTTAGCAACTTCTCGTGATTTAGCTATCGAACAAAACTTGTCGATTTTGCGTAAGCGTGTGGAAGAA CTTGGTGTGTCTGAGCCGACTATTCAACGTCAAGGGGCAGATCGTATTGTTGTTGAACTTCCAGGTGTGCAAGATACCGC TCGTGCGAAAGAGATTTTAGGGGCAACTGCAACTCTTGAATTTCGTTTAGTCAATGGTAATGCTAACTTAGAGTCTGCGG CTCGTGGTATTGTTCCTGCAGATTCGGAGATTAAATATAGTCGTGATGGTATGCCGACGGTGTTATATCGCAAAACCATT TTAGGTGGTGAGCATATTATTAATGCAACTTCGGGCAAAGATGAACGTGGTTTGCCTAATGTTAGTATTAATCTTGATGC ACAAGGCGGGGATTTGATGTCAAATGCGACAAAATCTGCTGTAGGTAAGCCGATGGCAACCCTTTATAGTGAGTTTAAAG ATTCAGGTCGCCGTGATGCAAACGGGAAAGTGATTCTTGAAAAACACGAAGAAGTGATTAACGTTGCAACCATTAACTCT CGTTTAGGTAGCTCATTCCAAATTACAGGTATTAATAGTGCGGCTGAAGCACAAAACCTTGCTGTATTACTACGTTCTGG AGCTTTGATCGCACCGATTGTGATTGTTGAAGAACGAACTATCGGGGCTTCATTAGGTGCAGATAACGTTGCTCAAGGTA TGGACGCAAGTATGTTAGGTTTAGGTCTAACGATCTTATTCTGCGTGGTGTACTACAAAGTCTTCGGCCTATTTGCGACA GCTGCTTTATTAGCTAACTTAGTTTTAACCATCGGGTTGATGTCATTAATCGGAGCTACATTAACAATGCCTGGTATTGC AGGGATTGTGTTAGCTGTAGGTATGTCAATTGATGCTAACGTATTGATTTATGAACGGATTAAAGAAGAAATTCGTAATG GTCGTTCTATTCAGCAGGCAATTCACGAAGGCTATAATGGTGCATTCACCAGTATCTTCGACTCTAACTTAACCACAATA TTAGTTGCGATTATTCTTTATTCAGTAGGAACAGGTCCAGTCAAAGGCTTCGCTGTGACTCTTGCATTAGGGGTAATGAT CTCAATGTTCACCGCAATTACAGGAACTCGTATGTTAGTGAACCTTGTTTACGGTGGTAAACGTGTGAAAAAACTTTGGA TCTAA Protein sequence : MLNRFPLWKNLMVILVVAIGILYALPNLYGEDPSVQVSGTRGQQASDETLTQVQSALASLNITPKAMNLENGSILVRLNK DEEQLPAKEKIAEVLGNNYSVALNLAPATPEWLTSIGGEPMKRGLDLRGGVRFLMEVDMNTALAKQQDQLQDTLRNDFRK EKWQYKAVKKAENFATDVEFNDTDTADKAVRYIRRTNPNLEATYISPTVVRFAQSAQGLATSRDLAIEQNLSILRKRVEE LGVSEPTIQRQGADRIVVELPGVQDTARAKEILGATATLEFRLVNGNANLESAARGIVPADSEIKYSRDGMPTVLYRKTI LGGEHIINATSGKDERGLPNVSINLDAQGGDLMSNATKSAVGKPMATLYSEFKDSGRRDANGKVILEKHEEVINVATINS RLGSSFQITGINSAAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVAQGMDASMLGLGLTILFCVVYYKVFGLFAT AALLANLVLTIGLMSLIGATLTMPGIAGIVLAVGMSIDANVLIYERIKEEIRNGRSIQQAIHEGYNGAFTSIFDSNLTTI LVAIILYSVGTGPVKGFAVTLALGVMISMFTAITGTRMLVNLVYGGKRVKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-124 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-124 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-124 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-124 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-124 | 47 |
