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Name : M062_07920 (M062_07920) Accession : YP_008132029.1 Strain : Pseudomonas aeruginosa RP73 Genome accession: NC_021577 Putative virulence/resistance : Unknown Product : heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1663944 - 1665917 bp Length : 1974 bp Strand : + Note : cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGATCCCCGAACTCGGCCACCTGGCCCTGATCCTCGCCCTCTGCCTGGCCCTGGTGCAGTCGAGCCTGCCGCTGGTCGG CGCCTGGCGCGGCGACCGCCAGTGGATGAGCCTGGCGCGCCCGGCGGCCTGGGGGCAGTTCGCCTTCCTCGCCTTCGCCT TCGGTTGCCTGACCTGGGCCTTCCTGCGCGACGACTTCTCGGTGGCCTACGTGGCCGGCAACTCCAACAGCGCGCTGCCC TGGTACTACAAGTTCAGCGCCGTCTGGGGCGCCCACGAAGGTTCGCTGCTGCTCTGGGCGCTGATCCTCGGTGGCTGGAC CTTCGCCGTGTCGATCTTCTCCCGGCAACTGCCGGAGGTCATGCTGGCCCGCGTGCTGGCGGTGATGGGCATGATCAGCA CCGGCTTCCTGCTGTTCCTGATCATCACCTCCAACCCGTTCAGCCGCCTGCTGCCGCAGACCCCGATGGACGGCAACGAC CTCAACCCGCTGCTGCAGGACGTCGGCCTGATCGTCCACCCGCCGATGCTCTACATGGGTTACGTCGGATTCTCGGTGGC CTTCGCCTTCGCCATCGCCGCACTGCTCGGCGGCCGCCTGGACGCCGCCTGGGCGCGCTGGTCGCGGCCCTGGACCCTGG TAGCCTGGGCCTTCCTCGGTATCGGCATCGTGCTCGGCTCCTGGTGGGCCTACTACGAGCTGGGCTGGGGGGGCTGGTGG TTCTGGGATCCGGTGGAAAACGCCTCCTTCATGCCCTGGCTGGTCGGCACTGCACTGATCCACTCGCTGGCGGTGACCGA GAAGCGCGGCGTGTTCAAGAGCTGGACCGTGCTTCTGGCGATCGCCGCTTTCTCCCTGAGCCTGCTGGGCACCTTCCTGG TCCGCTCCGGCGTGCTCACCTCGGTGCACGCCTTCGCCTCCGACCCGGAGCGCGGGGTGTTCATCCTCGCCTTCCTGCTG CTGGTGGTCGGCGGCTCGCTGACCCTGTTCGCCCTGCGCGCGCCGGTGGTCAAGAGCCAGGTCGGCTTCGCCCTGTGGTC GCGCGAGACCCTGCTGCTGCTGAACAACCTGGTGCTGGTGGTGGCGGCCTCGATGATCCTCCTCGGGACCCTCTACCCGC TGCTGCTCGATGCCCTCAGCGGCGCCAAGCTGTCGGTCGGCCCGCCGTACTTCAACGCCATGTTCCTGCCGCTGATGGCG GCGCTGATGGCGGCGCTGGCGGTCGGCGTGCTGGTGCGCTGGAAGGACACCCCGAGCCGCTGGCTGCTCGGCATGCTGAC CCCGGTGCTGGTGGCCAGCGCGGTCCTGGCGGCGGCCGGTTCGATGTACTTCGGCGATTTCAACTGGGCGGTGCTGGCGG TGTTCCTGCTGTCCGCCTGGGTGGTCCTGGCCGGTTTCCGCGACTTCCTCGACAAGACCCGGCACAAGGGCGTGCTGGCC GGCGCCCGCAGCCTGACCCGCAGCTACTGGGGCATGCAACTGGCGCACCTGGGCATCGCCGTGTGCGCCATCGGCATCGT CCTCAGCAGCCAGTACAGCGCCCAGCGTGACCTGCGCATGTCGCCCGGCGACACCGTCGAACTGGGCGGCTACCACTTCC TCTTCGACGGCGCGAAGCACCACGAAGGGCCGAACTACACCTCGGACAAGGGCAGCATCCACGTCAGCCGCGACGGCAAG GAGATCGCCACCCTGCATCCGGAGAAGCGCCTGTACACCGTGCAGAGTTCGATGATGACCGAGGCAGGGATCGATGCCGG CTTTACCCGCGACCTCTACGTGGCGCTCGGCGAGCCGCTGGAGAACGGTGCCTGGGCGGTGCGCGTGCACGTCAAGCCGT TCGTCCGCTGGATCTGGTTCGGTGGCCTGCTGATGGGCCTCGGCGGCGCCCTGGCGGCGCTCGACCGGCGCTACCGGGTG AAGGTGAAAACACGTGTGCGCGAGGCCCTGGGCCTCGCCGGTCAGGGAGCCTGA Protein sequence : MIPELGHLALILALCLALVQSSLPLVGAWRGDRQWMSLARPAAWGQFAFLAFAFGCLTWAFLRDDFSVAYVAGNSNSALP WYYKFSAVWGAHEGSLLLWALILGGWTFAVSIFSRQLPEVMLARVLAVMGMISTGFLLFLIITSNPFSRLLPQTPMDGND LNPLLQDVGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWAFLGIGIVLGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFILAFLL LVVGGSLTLFALRAPVVKSQVGFALWSRETLLLLNNLVLVVAASMILLGTLYPLLLDALSGAKLSVGPPYFNAMFLPLMA ALMAALAVGVLVRWKDTPSRWLLGMLTPVLVASAVLAAAGSMYFGDFNWAVLAVFLLSAWVVLAGFRDFLDKTRHKGVLA GARSLTRSYWGMQLAHLGIAVCAIGIVLSSQYSAQRDLRMSPGDTVELGGYHFLFDGAKHHEGPNYTSDKGSIHVSRDGK EIATLHPEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHVKPFVRWIWFGGLLMGLGGALAALDRRYRV KVKTRVREALGLAGQGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-132 | 58 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-121 | 57 |
