Gene Information

Name : M062_10670 (M062_10670)
Accession : YP_008132568.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2269890 - 2270396 bp
Length : 507 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :

ATGGGCATGGATCAGACACGCAATCGCCTCGTCGGCCTGATGTTCCAGAACGACTATTCCTGGCTGAGCGGGCGCCTGCG
GCGCTACCTCGGCTGCCCCCACAGCGCCGAGGACATCGCCTCGGAAACCTTCCTCAAGGTCCTTGCCCTGCCGGACCCGG
CAAGCATCCGCGAGCCGCGCGCGCTGCTCACCACCATCGCCCGCCGGCTGATGTACGACGGCTGGCGGCGCCAGGACCTG
GAACGCGCCTACCTGGAAAGCCTGGCCGGGCTTCCGGAGGCCCTCGCGCCGTCCGCCGAGGAGCAGGCCCAGGTGGTGGA
AACCCTGCTGCGCCTGGAGCGCATGCTCGCCGGGCTGTCGCCGAAGGCCCGCGCCGCCTTCATCCATAGCCAGATCGGCG
GACTGACCTACGTGGAGATCGCCGGCTTGCTGGAGGTTTCCGTCAGCCGCATCCACCAGTACATGGTCGAGGGCTTCAAG
CAGTGCTACCAGGTGCTTGCCGAATGA

Protein sequence :

MGMDQTRNRLVGLMFQNDYSWLSGRLRRYLGCPHSAEDIASETFLKVLALPDPASIREPRALLTTIARRLMYDGWRRQDL
ERAYLESLAGLPEALAPSAEEQAQVVETLLRLERMLAGLSPKARAAFIHSQIGGLTYVEIAGLLEVSVSRIHQYMVEGFK
QCYQVLAE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-28	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
M062_10670	YP_008132568.1	RNA polymerase sigma factor	VFG1049	Protein	1e-28	46