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Name : secD (M062_20190) Accession : YP_008134447.1 Strain : Pseudomonas aeruginosa RP73 Genome accession: NC_021577 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 4335763 - 4337625 bp Length : 1863 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTCAACAAGTATCCTCTGTGGAAATATCTGCTGATCCTGGCGGTCCTCGCCGTCGGGTTCATCTATTCCGCACCCAA CCTCTACCCGGACGACCCGGCGGTGCAGATCAGCGGCGCCAGCACGGCGCTGCAGGTCACCCAGGCCGACGTCGACCGCG CTGCCAAGGCGCTGACCGACGCCGGTATCGCGGTGAAGGCCGACAGCCTGTCGAAGAAGGGCGGCCTGATCCGCCTGGTC AAGCAGGACGACCAGCTTCCCGCCAAGGAAGTGGTGCGCCGGACCCTGGGCGACGACTACGTGGTGGCGCTGAACCTGGC CCAGACCACTCCCGAGTGGCTGCGCAAGCTGGGCGGCAGCCCGATGAAGCTCGGCCTGGATCTGTCCGGCGGTGTGCACT TCCTGCTGGAAGTGGACATGGACAAGGCGGTCGATGCCCGCCTGAAGGTCTATGAAAGCGAAGTGAAGAGCCTGCTGCGC AAGGAGCGCGTGCGCTACCGCAGCCTGCCGATCCAGGATCGCGCGATCCAGCTCGGTTTCACCGACAGCGAATCCCTGGA CAAGGCGCGCAGCCTGATCGCCAAGGACTTCCGCGATTTCGAGGTCGTGCCCGAAGAGCGCAACGGCTTGCAGGTCCTGC GCGTCGCCCTGACCCAGGCCAAACTGGCGGAAATCCGCGAATACTCCATCAAGCAGAACCTCACCACCGTCCGCAACCGG GTCAACGAGCTGGGCGTATCCGAGCCGCTGGTGCAGCGCCAGGGCGCCAATCGCATCGTGGTCGAGCTGCCGGGCGTGCA GGACACCGCGGAAGCCAAGCGGATCCTCGGCAAGACCGCCAACCTAGAATTCCGCCTGGCCGCCGAGCCGGACGCCCTGA AGTCCGCCACCGAGACCTTCGAGTTCCGCGAGCCGCGCCGGCCGCCGGTGCCGCTGGAGCGCGGGGTGATCATCACCGGC GACCAGGTCACCGACGCCAGCGCCAGTTTCGACGAGAACGGCCGCCCGCAGGTGAACATCCGCCTGGATGGCCATGGCGG CGAGCTGATGAACCGCGCCACCCGCAACAACGTCGGCCGCAGCATGGCGGTGGTGTTCATCGAGCAGAAGCCGGTGTCCC GCTACACCAAGCAGATGGTCGATGGCGTCGAGAAGGAGGTCGCGGTTCCGGCGTTCAAGGAAGAGAAGCAGATCATCAGC CTGGCGACCATCCAGTCGCCGCTGGGCAACCAGTTCCGTATCACCGGCCTCGATGGCCCGGGCGAGTCCTCCGAGCTGGC CCTGCTGCTGCGTGCCGGCGGCCTGGCTGCGCCGATGTACTTCGCCGAAGAACGCACCATCGGCCCGAGCCTGGGGGCGG ACAACATCGCCAAGGGTATCGATGCGTCGCTCTGGGGCATGCTCTTCGTATCGCTGTTCATCATCGTCATCTACCGTTTC TTCGGCGTGATCGCCACCGTTGCGCTGGCTTTCAACATGGTCATGCTGGTGGCGCTGATGTCGATCCTCGGCGCGACCCT GACCCTGCCGGGCATCGCCGGTATCGTGCTGACCATGGGCATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGGATAC GCGAGGAACTGGCCAATGGCATGTCGGTCCAGAGGGCGATCCACGAAGGCTTCAACCGTGCCTTCACCGCGATCCTCGAC GCCAACCTGACCTCGCTGCTGGTCGGCGGCATCCTCTACGCCATGGGCACCGGCCCGGTGAAAGGATTTGCCGTGACCAT GTCGCTCGGCATCATCACCTCGATGTTCACGGCCATCATGGTCACCCGCGCAATGGTCAACCTGATCTTCGGCGGGCGTG ACTTCAAGAAGCTGTGGATCTAA Protein sequence : MLNKYPLWKYLLILAVLAVGFIYSAPNLYPDDPAVQISGASTALQVTQADVDRAAKALTDAGIAVKADSLSKKGGLIRLV KQDDQLPAKEVVRRTLGDDYVVALNLAQTTPEWLRKLGGSPMKLGLDLSGGVHFLLEVDMDKAVDARLKVYESEVKSLLR KERVRYRSLPIQDRAIQLGFTDSESLDKARSLIAKDFRDFEVVPEERNGLQVLRVALTQAKLAEIREYSIKQNLTTVRNR VNELGVSEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPDALKSATETFEFREPRRPPVPLERGVIITG DQVTDASASFDENGRPQVNIRLDGHGGELMNRATRNNVGRSMAVVFIEQKPVSRYTKQMVDGVEKEVAVPAFKEEKQIIS LATIQSPLGNQFRITGLDGPGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNIAKGIDASLWGMLFVSLFIIVIYRF FGVIATVALAFNMVMLVALMSILGATLTLPGIAGIVLTMGMAVDANVLIFSRIREELANGMSVQRAIHEGFNRAFTAILD ANLTSLLVGGILYAMGTGPVKGFAVTMSLGIITSMFTAIMVTRAMVNLIFGGRDFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
